RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 FBXL17Q9UF56 701 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 ANK3Q12955 4377 aaKnown RBP6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 TRBV9A0A0B4J1U6 114 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 A0A0G2JLM5 398 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 A0A1B0GUS0 222 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 HMSDA8MTL9 139 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 IGHV3-11P01762 117 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 IGHV3-23P01764 117 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 RPLP1P05386 114 aaKnown RBP6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 CXCL2P19875 107 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 S100A11P31949 105 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 GPX4P36969 197 aaPredicted RBP6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 RAB9AP51151 201 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 RND2P52198 227 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 PROK1P58294 105 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 DLK1P80370 383 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR2F1Q13607 317 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 ZNF345Q14585 488 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 Q56UQ5 140 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 PVRIGQ6DKI7 326 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 VN1R17PQ8TDU5 208 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 SCARB1Q8WTV0 552 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 EEF1AKMT3Q96AZ1 226 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 USMG5Q96IX5 58 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 CXorf58Q96LI9 332 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR5B12Q96R08 314 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 ATP5SQ99766 215 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 C19orf24Q9BVV8 132 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 FNDC4Q9H6D8 234 aaPredicted RBP6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 UQCC1Q9NVA1 299 aa6.16□□□□□ -1.42
HMGA1P4-201ENST00000428643 A0A0D9SG52 128 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 KANTRA0A1W2PQU2 76 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 A0A1W2PRX2 142 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 TCRBV4S1A1TA0A5B7 111 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 PMS2P5A8MQ11 134 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 NUDT19A8MXV4 375 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 PRSS46E5RG02 174 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 BCL2L11O43521 198 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 GNG7O60262 68 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 SCGB2A1O75556 95 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 DFFBO76075 338 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 BRI3O95415 125 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 IFNA5P01569 189 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 CD28P10747 220 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 GPR183P32249 361 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 MFAP4P55083 255 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 MLANAQ16655 118 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 KLK9Q2XQG4 91 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 AWAT1Q58HT5 328 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 TCTEX1D4Q5JR98 221 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 C9orf62Q8N4C0 152 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 KCNRGQ8N5I3 272 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 RNF152Q8N8N0 203 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 ZNF502Q8TBZ5 544 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 WFDC12Q8WWY7 111 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 CACNG8Q8WXS5 425 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 TMEM158Q8WZ71 300 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 ARPC5LQ9BPX5 153 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 GGACTQ9BVM4 153 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 ARL6Q9H0F7 186 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 GNB4Q9HAV0 340 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 MRPL36Q9P0J6 103 aaKnown RBP6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 KLK9Q9UKQ9 250 aa6.15□□□□□ -1.42
HMGA1P4-201ENST00000428643 TNCP24821 2201 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 TRBV7-1A0A0A6YYK4 115 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 BORCS7-ASMTA0A0B4J1R7 106 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 ANKRD34BA5PLL1 514 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 OR2T8A6NH00 312 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZFP92A6NM28 416 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 FNDC10F2Z333 226 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 LGALS1P09382 135 aaKnown RBP6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 C4BPBP20851 252 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 FGF7P21781 194 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 OR10J1P30954 320 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 NPBWR1P48145 328 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 GAMTQ14353 236 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZNF266Q14584 549 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 ATP6V1FQ16864 119 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 HIST2H2BDQ6DRA6 164 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 CLEC19AQ6UXS0 136 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 TMUB2Q71RG4 321 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 KLHL30-AS1Q8NEE0 82 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 SCGB1C1Q8TD33 95 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 MYOZ3Q8TDC0 251 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 WIPF2Q8TF74 440 aaPredicted RBP6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 NPIPB3Q92617 1050 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 PPP1R14BQ96C90 147 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 UBE2E2Q96LR5 201 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 CCDC140Q96MF4 163 aa6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 CITED2Q99967 270 aaPredicted RBP6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 GAR1Q9NY12 217 aaKnown RBP6.14□□□□□ -1.43
HMGA1P4-201ENST00000428643 ATRQ13535 2644 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 PPP5D1E7EU14 171 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 TAAR5O14804 337 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 NUPL2O15504 423 aaKnown RBP6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 CLN5O75503 358 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 FABP1P07148 127 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 ARL3P36405 182 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 VWC2Q2TAL6 325 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 LGALSLQ3ZCW2 172 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms