RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 FAM103A1Q9BTL3 118 aaKnown RBP6.49□□□□□ -1.37
SMARCAL1-206ENST00000427645 TMEM147Q9BVK8 224 aa6.49□□□□□ -1.37
SMARCAL1-206ENST00000427645 PARP11Q9NR21 331 aa6.49□□□□□ -1.37
SMARCAL1-206ENST00000427645 CYTL1Q9NRR1 136 aa6.49□□□□□ -1.37
SMARCAL1-206ENST00000427645 TNFRSF19Q9NS68 423 aa6.49□□□□□ -1.37
SMARCAL1-206ENST00000427645 KLK9Q9UKQ9 250 aa6.49□□□□□ -1.37
SMARCAL1-206ENST00000427645 DNAJC9-AS1A6NH13 148 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 PRSS46E5RG02 174 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 H3BUA1 57 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 REG1AP05451 166 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 CRYBA1P05813 215 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 APELAP0DMC3 54 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 OPRK1P41145 380 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 ARL16Q0P5N6 197 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 CLINT1Q14677 625 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 RPL7L1Q6DKI1 246 aaKnown RBP6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 TEX261Q6UWH6 196 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 TREML4Q6UXN2 200 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 HAPLN4Q86UW8 402 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 OR5T1Q8NG75 326 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 TMEM170AQ8WVE7 144 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 ST8SIA2Q92186 375 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 MISP3Q96FF7 219 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 GINS3Q9BRX5 216 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 ARV1Q9H2C2 271 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 WFDC1Q9HC57 220 aa6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 PRKDCP78527 4128 aaKnown RBP6.48□□□□□ -1.37
SMARCAL1-206ENST00000427645 PLXNB1O43157 2135 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 TGP01266 2768 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 IGLV11-55A0A075B6I3 123 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 TRAV30A0A087WSZ9 112 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 LINC01548A6NM66 108 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 C17orf112F2Z3M2 114 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 SCGB2A1O75556 95 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 RNASE1P07998 156 aaKnown RBP6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 SEC11BP0C7V7 166 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 MDKP21741 143 aaPredicted RBP6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 SLC35B1P78383 322 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 SERF2P84101 59 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 NDPQ00604 133 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 FOXL1Q12952 345 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 ECSCRQ19T08 205 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 ASPHD1Q5U4P2 390 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 TEPPQ6URK8 271 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 ZNF767PQ75MW2 155 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 TMEM144Q7Z5S9 345 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 CENPVQ7Z7K6 275 aaPredicted RBP6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 Q8N2B8 174 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 ZNF709Q8N972 641 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 LRRC20Q8TCA0 184 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 VN1R17PQ8TDU5 208 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 BSCL2Q96G97 398 aaPredicted RBP6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 SLC35E1Q96K37 410 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 CXorf58Q96LI9 332 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 TXN2Q99757 166 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 WDR61Q9GZS3 305 aaKnown RBP6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 ZNF355PQ9NSJ1 428 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 GAR1Q9NY12 217 aaKnown RBP6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 FBXO7Q9Y3I1 522 aa6.47□□□□□ -1.37
SMARCAL1-206ENST00000427645 TRBV9A0A0B4J1U6 114 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 SMCO3A2RU48 225 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 SH2D7A6NKC9 451 aaPredicted RBP6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 G3V318 75 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 I3L2K1 104 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 MT-CO2P00403 227 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 SPP1P10451 314 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 PPIFP30405 207 aaKnown RBP6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 NPBWR1P48145 328 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 MFAP2P55001 183 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 AKR1C1Q04828 323 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 GAMTQ14353 236 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 C19orf54Q5BKX5 351 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 FAM209BQ5JX69 171 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 SLC16A13Q7RTY0 426 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 NECAP1Q8NC96 275 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 TMEM116Q8NCL8 245 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 ZNF680Q8NEM1 530 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 OR4X1Q8NH49 305 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 OR2T6Q8NHC8 308 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 SCARB1Q8WTV0 552 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 USMG5Q96IX5 58 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 ATP6V0BQ99437 205 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 PSMG3Q9BT73 122 aaPredicted RBP6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 KCNIP2Q9NS61 270 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 WDR83OSQ9Y284 106 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 TIMM9Q9Y5J7 89 aa6.46□□□□□ -1.38
SMARCAL1-206ENST00000427645 A0A0G2JLM5 398 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 UBE2L5PA0A1B0GUS4 154 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 FAM181BA6NEQ2 426 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 FAM223BA6NKX1 122 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 UMAD1C9J7I0 102 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 IGLV1-40P01703 118 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 MBP02144 154 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 FABP1P07148 127 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 CD33P20138 364 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 FGF7P21781 194 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 ATP6V0CP27449 155 aa6.45□□□□□ -1.38
SMARCAL1-206ENST00000427645 FCGR2BP31994 310 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms