RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 ATG12O94817 140 aa14.32□□□□□ -0.12
COL9A2-204ENST00000427563 AKR1C4P17516 323 aa14.32□□□□□ -0.12
COL9A2-204ENST00000427563 SUPT4H1P63272 117 aaKnown RBP14.32□□□□□ -0.12
COL9A2-204ENST00000427563 BSXQ3C1V8 233 aa14.32□□□□□ -0.12
COL9A2-204ENST00000427563 RRNAD1Q96FB5 475 aaKnown RBP14.32□□□□□ -0.12
COL9A2-204ENST00000427563 CITED4Q96RK1 184 aa14.32□□□□□ -0.12
COL9A2-204ENST00000427563 C20orf85Q9H1P6 137 aa14.32□□□□□ -0.12
COL9A2-204ENST00000427563 FNDC4Q9H6D8 234 aaPredicted RBP14.32□□□□□ -0.12
COL9A2-204ENST00000427563 SRD5A3Q9H8P0 318 aa14.32□□□□□ -0.12
COL9A2-204ENST00000427563 TMEM56-RWDD3S4R434 201 aa14.32□□□□□ -0.12
COL9A2-204ENST00000427563 TRAV25A0A0B4J276 109 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 K7EMT4 169 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 DHODHQ02127 395 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 MLANAQ16655 118 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 TMEM268Q5VZI3 342 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 NRARPQ7Z6K4 114 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 ENKURQ8TC29 256 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 GALNT14Q96FL9 552 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 TXN2Q99757 166 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 C20orf24Q9BUV8 137 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 EDA2RQ9HAV5 297 aa14.31□□□□□ -0.12
COL9A2-204ENST00000427563 HOXA1P49639 335 aaPredicted RBP14.3□□□□□ -0.12
COL9A2-204ENST00000427563 TMEM128Q5BJH2 165 aa14.3□□□□□ -0.12
COL9A2-204ENST00000427563 FAM219AQ8IW50 185 aa14.3□□□□□ -0.12
COL9A2-204ENST00000427563 RNASE11Q8TAA1 199 aaKnown RBP14.3□□□□□ -0.12
COL9A2-204ENST00000427563 OR10C1Q96KK4 312 aa14.3□□□□□ -0.12
COL9A2-204ENST00000427563 SPATA25Q9BR10 227 aa14.3□□□□□ -0.12
COL9A2-204ENST00000427563 HIPK2Q9H2X6 1198 aa14.3□□□□□ -0.12
COL9A2-204ENST00000427563 NUDT15Q9NV35 164 aa14.3□□□□□ -0.12
COL9A2-204ENST00000427563 CACNG5Q9UF02 275 aa14.3□□□□□ -0.12
COL9A2-204ENST00000427563 TRAV6A0A075B6T7 132 aa14.29□□□□□ -0.12
COL9A2-204ENST00000427563 C15orf62A8K5M9 175 aa14.29□□□□□ -0.12
COL9A2-204ENST00000427563 NUPL2O15504 423 aaKnown RBP14.29□□□□□ -0.12
COL9A2-204ENST00000427563 ANXA7P20073 488 aaKnown RBP14.29□□□□□ -0.12
COL9A2-204ENST00000427563 SPCS3P61009 180 aa14.29□□□□□ -0.12
COL9A2-204ENST00000427563 UBE2MP61081 183 aaKnown RBP14.29□□□□□ -0.12
COL9A2-204ENST00000427563 DUSP18Q8NEJ0 188 aa14.29□□□□□ -0.12
COL9A2-204ENST00000427563 OR52B4Q8NGK2 314 aa14.29□□□□□ -0.12
COL9A2-204ENST00000427563 OR52E5Q8NH55 327 aa14.29□□□□□ -0.12
COL9A2-204ENST00000427563 MUC7Q8TAX7 377 aa14.29□□□□□ -0.12
COL9A2-204ENST00000427563 TMEM170AQ8WVE7 144 aa14.29□□□□□ -0.12
COL9A2-204ENST00000427563 IGHV3-49A0A0A0MS15 119 aa14.28□□□□□ -0.12
COL9A2-204ENST00000427563 TSPAN4O14817 238 aa14.28□□□□□ -0.12
COL9A2-204ENST00000427563 SNCAP37840 140 aa14.28□□□□□ -0.12
COL9A2-204ENST00000427563 RELQ04864 619 aaPredicted RBP14.28□□□□□ -0.12
COL9A2-204ENST00000427563 PPP1R1AQ13522 171 aa14.28□□□□□ -0.12
COL9A2-204ENST00000427563 PDCD10Q9BUL8 212 aa14.28□□□□□ -0.12
COL9A2-204ENST00000427563 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.28□□□□□ -0.12
COL9A2-204ENST00000427563 GAR1Q9NY12 217 aaKnown RBP14.28□□□□□ -0.12
COL9A2-204ENST00000427563 SMPXQ9UHP9 88 aa14.28□□□□□ -0.12
COL9A2-204ENST00000427563 KCNIP3Q9Y2W7 256 aa14.28□□□□□ -0.12
COL9A2-204ENST00000427563 IGHV7-4-1A0A0J9YVY3 117 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 C3orf84H3BNL1 204 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 CHEK1O14757 476 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 GNG7O60262 68 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 NXPH3O95157 252 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 SFT2D2O95562 160 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 TMEM50AO95807 157 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 H2AFB2P0C5Z0 115 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 NMSQ5H8A3 153 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 TOMM20LQ6UXN7 152 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 RBPMS2Q6ZRY4 209 aaKnown RBP14.27□□□□□ -0.13
COL9A2-204ENST00000427563 SLC16A13Q7RTY0 426 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 IL22RA2Q969J5 263 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 RNF2Q99496 336 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 SPAG8Q99932 426 aaPredicted RBP14.27□□□□□ -0.13
COL9A2-204ENST00000427563 FAM110AQ9BQ89 295 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 ZFAND3Q9H8U3 227 aa14.27□□□□□ -0.13
COL9A2-204ENST00000427563 APOHP02749 345 aaPredicted RBP14.26□□□□□ -0.13
COL9A2-204ENST00000427563 OR4E1P0C645 316 aa14.26□□□□□ -0.13
COL9A2-204ENST00000427563 ANXA3P12429 323 aa14.26□□□□□ -0.13
COL9A2-204ENST00000427563 VAMP1P23763 118 aa14.26□□□□□ -0.13
COL9A2-204ENST00000427563 ODF3L2Q3SX64 289 aa14.26□□□□□ -0.13
COL9A2-204ENST00000427563 LYZL2Q7Z4W2 148 aa14.26□□□□□ -0.13
COL9A2-204ENST00000427563 RHPN1-AS1Q9BWJ2 59 aa14.26□□□□□ -0.13
COL9A2-204ENST00000427563 UBQLN2Q9UHD9 624 aa14.26□□□□□ -0.13
COL9A2-204ENST00000427563 IGHV3OR16-13A0A075B7E8 117 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 IGHV3-74A0A0B4J1X5 117 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 A0A1B0GU03 582 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 C9orf170A2RU37 121 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 YIF1AO95070 293 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 PTTG1O95997 202 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 DHRS2Q13268 280 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 CASC10Q5T4H9 136 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 FAM90A2PQ658T7 463 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 LILRB2Q8N423 598 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 TMEM116Q8NCL8 245 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 ENY2Q9NPA8 101 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 SACSQ9NZJ4 4579 aa14.25□□□□□ -0.13
COL9A2-204ENST00000427563 CORTO00230 105 aa14.24□□□□□ -0.13
COL9A2-204ENST00000427563 NPBWR1P48145 328 aa14.24□□□□□ -0.13
COL9A2-204ENST00000427563 SRPXP78539 464 aa14.24□□□□□ -0.13
COL9A2-204ENST00000427563 ANKRD55Q3KP44 614 aa14.24□□□□□ -0.13
COL9A2-204ENST00000427563 C4orf46Q504U0 113 aa14.24□□□□□ -0.13
COL9A2-204ENST00000427563 LYG2Q86SG7 212 aa14.24□□□□□ -0.13
COL9A2-204ENST00000427563 OR4X1Q8NH49 305 aa14.24□□□□□ -0.13
COL9A2-204ENST00000427563 PUS1Q9Y606 427 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL9A2-204ENST00000427563 LYSTQ99698 3801 aa14.24□□□□□ -0.13
COL9A2-204ENST00000427563 A0A0B4J2A0 478 aa14.23□□□□□ -0.13
COL9A2-204ENST00000427563 CLN5O75503 358 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms