RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 PAX8Q06710 450 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 MUC6Q6W4X9 2439 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 PCNX2A6NKB5 2137 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 C5orf64Q2M2E5 130 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 LY6G6FQ5SQ64 297 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 OR10W1Q8NGF6 305 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 FMC1Q96HJ9 113 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 IFT22Q9H7X7 185 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 ZFHX2Q9C0A1 2572 aaPredicted RBP11.4□□□□□ -0.58
RPL28-202ENST00000426763 ZNF407Q9C0G0 2248 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 TRAV34A0A0B4J273 112 aa11.4□□□□□ -0.59
RPL28-202ENST00000426763 FBLL1A6NHQ2 334 aaKnown RBP11.4□□□□□ -0.59
RPL28-202ENST00000426763 VENTXO95231 258 aa11.4□□□□□ -0.59
RPL28-202ENST00000426763 RNF224P0DH78 156 aa11.4□□□□□ -0.59
RPL28-202ENST00000426763 LDLRAD2Q5SZI1 272 aa11.4□□□□□ -0.59
RPL28-202ENST00000426763 SFRP2Q96HF1 295 aa11.4□□□□□ -0.59
RPL28-202ENST00000426763 Q9H3A6 140 aa11.4□□□□□ -0.59
RPL28-202ENST00000426763 ZNF56Q15929 161 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 NSUN5P1Q3KNT7 163 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 PUSL1Q8N0Z8 303 aaKnown RBP11.39□□□□□ -0.59
RPL28-202ENST00000426763 MAP1LC3AQ9H492 121 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 MBNL3Q9NUK0 354 aaKnown RBP11.39□□□□□ -0.59
RPL28-202ENST00000426763 C10orf55Q5SWW7 151 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 C11orf44Q8N8P7 122 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 ASIPP42127 132 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 HERPUD1Q15011 391 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 FAM74A4Q5TZK3 123 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 OTORQ9NRC9 128 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 K7EM74 188 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 NBASA2RRP1 2371 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 CD55P08174 381 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 BTF3P20290 206 aaKnown RBP11.39□□□□□ -0.59
RPL28-202ENST00000426763 C2orf83Q53S99 150 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 DUX3Q96PT4 197 aa11.39□□□□□ -0.59
RPL28-202ENST00000426763 SRD5A1P18405 259 aa11.38□□□□□ -0.59
RPL28-202ENST00000426763 SCGB1D4Q6XE38 83 aa11.38□□□□□ -0.59
RPL28-202ENST00000426763 PACRGQ96M98 296 aaPredicted RBP11.38□□□□□ -0.59
RPL28-202ENST00000426763 RSPO3Q9BXY4 272 aaPredicted RBP11.38□□□□□ -0.59
RPL28-202ENST00000426763 CXorf65A6NEN9 183 aa11.38□□□□□ -0.59
RPL28-202ENST00000426763 Q6ZR03 302 aa11.38□□□□□ -0.59
RPL28-202ENST00000426763 MDKP21741 143 aaPredicted RBP11.38□□□□□ -0.59
RPL28-202ENST00000426763 SAA4P35542 130 aa11.38□□□□□ -0.59
RPL28-202ENST00000426763 TCF24Q7RTU0 167 aa11.38□□□□□ -0.59
RPL28-202ENST00000426763 ROS1P08922 2347 aa11.38□□□□□ -0.59
RPL28-202ENST00000426763 PHF3Q92576 2039 aaKnown RBP11.37□□□□□ -0.59
RPL28-202ENST00000426763 ZNF503-AS2A6NEH8 195 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 GGCTO75223 188 aaKnown RBP11.37□□□□□ -0.59
RPL28-202ENST00000426763 PAX1P15863 534 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 C15orf32Q32M92 178 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 LHFPL5Q8TAF8 219 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 SCGB1C2P0DMR2 95 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 C19orf54Q5BKX5 351 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 ZNF383Q8NA42 475 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 ZNF581Q9P0T4 197 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 WDR83OSQ9Y284 106 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 POLEQ07864 2286 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 C9JCJ5 164 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 DUSP14O95147 198 aaKnown RBP11.37□□□□□ -0.59
RPL28-202ENST00000426763 AREGP15514 252 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 NTF4P34130 210 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 STHQ8IWL8 128 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 MRPL18Q9H0U6 180 aaKnown RBP11.37□□□□□ -0.59
RPL28-202ENST00000426763 ITGB1BP1O14713 200 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 DLX1P56177 255 aa11.37□□□□□ -0.59
RPL28-202ENST00000426763 SPTBN1Q01082 2364 aaKnown RBP11.36□□□□□ -0.59
RPL28-202ENST00000426763 Q96MF0 132 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 SCO2A0A1W2PP80 73 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 OR4C46A6NHA9 309 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 LMO1P25800 156 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 UBE2E1P51965 193 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 LINC01587Q99440 93 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 NEU1Q99519 415 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 IGLV3-9A0A075B6K5 115 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 H0YIZ8 118 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 UQCRFS1P47985 274 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 CIARTQ8N365 385 aaPredicted RBP11.36□□□□□ -0.59
RPL28-202ENST00000426763 CBY3A6NI87 242 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 LINC00473A8K010 186 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 ATP5G3P48201 142 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 TAS2R60P59551 318 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 SUPT4H1P63272 117 aaKnown RBP11.36□□□□□ -0.59
RPL28-202ENST00000426763 BEND2Q8NDZ0 799 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 SIGLEC9Q9Y336 463 aa11.36□□□□□ -0.59
RPL28-202ENST00000426763 DKK1O94907 266 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 NUDT3O95989 172 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 IFITM2Q01629 132 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 SNRNP200O75643 2136 aaKnown RBP11.35□□□□□ -0.59
RPL28-202ENST00000426763 TRBV9A0A0B4J1U6 114 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 IGKV1-5P01602 117 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 ZNF585BQ52M93 769 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 SPSB3Q6PJ21 355 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 H7C1H1 209 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 CFPP27918 469 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 LEPP41159 167 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 C5orf24Q7Z6I8 188 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 RNASE4P34096 147 aaKnown RBP11.35□□□□□ -0.59
RPL28-202ENST00000426763 BIVMQ86UB2 503 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 RNF138Q8WVD3 245 aa11.35□□□□□ -0.59
RPL28-202ENST00000426763 HBBP68871 147 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms