RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 ELLP55199 621 aaPredicted RBP13.64□□□□□ -0.23
HERC3-205ENST00000426683 RELQ04864 619 aaPredicted RBP13.64□□□□□ -0.23
HERC3-205ENST00000426683 ZNF846Q147U1 533 aa13.64□□□□□ -0.23
HERC3-205ENST00000426683 MLANAQ16655 118 aa13.64□□□□□ -0.23
HERC3-205ENST00000426683 GGNBP1Q5YKI7 109 aa13.64□□□□□ -0.23
HERC3-205ENST00000426683 UXS1Q8NBZ7 420 aa13.64□□□□□ -0.23
HERC3-205ENST00000426683 COQ8AQ8NI60 647 aa13.64□□□□□ -0.23
HERC3-205ENST00000426683 DTD1Q8TEA8 209 aa13.64□□□□□ -0.23
HERC3-205ENST00000426683 C20orf24Q9BUV8 137 aa13.64□□□□□ -0.23
HERC3-205ENST00000426683 FNDC4Q9H6D8 234 aaPredicted RBP13.64□□□□□ -0.23
HERC3-205ENST00000426683 TECRQ9NZ01 308 aaKnown RBP13.64□□□□□ -0.23
HERC3-205ENST00000426683 SELENOKQ9Y6D0 94 aa13.64□□□□□ -0.23
HERC3-205ENST00000426683 SMAD5-AS1Q9Y6J3 95 aa13.64□□□□□ -0.23
HERC3-205ENST00000426683 TCRBP04435 133 aa13.63□□□□□ -0.23
HERC3-205ENST00000426683 NPY1RP25929 384 aa13.63□□□□□ -0.23
HERC3-205ENST00000426683 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
HERC3-205ENST00000426683 MARC2Q969Z3 335 aa13.63□□□□□ -0.23
HERC3-205ENST00000426683 MRPL36Q9P0J6 103 aaKnown RBP13.63□□□□□ -0.23
HERC3-205ENST00000426683 MRPL27Q9P0M9 148 aaKnown RBP13.63□□□□□ -0.23
HERC3-205ENST00000426683 IGHV3OR16-8A0A075B7F1 116 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 RPS10-NUDT3A0A1W2PQS6 291 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 ADAP1O75689 374 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 IFNA10P01566 189 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 C8orf88P0DMB2 117 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 CD69Q07108 199 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 BTNL8Q6UX41 500 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 NOXA1Q86UR1 476 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 RNASEH2CQ8TDP1 164 aaKnown RBP13.62□□□□□ -0.23
HERC3-205ENST00000426683 ZNF414Q96IQ9 312 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 B9D2Q9BPU9 175 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 DAZ1Q9NQZ3 744 aaKnown RBP13.62□□□□□ -0.23
HERC3-205ENST00000426683 MLXQ9UH92 298 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 TBC1D24Q9ULP9 559 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 U3KQ87 197 aa13.62□□□□□ -0.23
HERC3-205ENST00000426683 TRAV6A0A075B6T7 132 aa13.61□□□□□ -0.23
HERC3-205ENST00000426683 ZNF207O43670 478 aaKnown RBP13.61□□□□□ -0.23
HERC3-205ENST00000426683 YIF1AO95070 293 aa13.61□□□□□ -0.23
HERC3-205ENST00000426683 TMEM50AO95807 157 aa13.61□□□□□ -0.23
HERC3-205ENST00000426683 Q8N1Y9 231 aa13.61□□□□□ -0.23
HERC3-205ENST00000426683 OR52B4Q8NGK2 314 aa13.61□□□□□ -0.23
HERC3-205ENST00000426683 ZNF785A8K8V0 405 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 FAM90A26D6RGX4 464 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 K7EMT4 169 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 CLN5O75503 358 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 UPK1BO75841 260 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 ASAH1Q13510 395 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 GUCA2BQ16661 112 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 MZT2BQ6NZ67 158 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 GTSCR1Q86UQ5 136 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 OR4X1Q8NH49 305 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 WDR89Q96FK6 387 aaPredicted RBP13.6□□□□□ -0.23
HERC3-205ENST00000426683 NUDT15Q9NV35 164 aa13.6□□□□□ -0.23
HERC3-205ENST00000426683 FAM240BA0A1B0GVZ2 78 aa13.59□□□□□ -0.23
HERC3-205ENST00000426683 C15orf62A8K5M9 175 aa13.59□□□□□ -0.23
HERC3-205ENST00000426683 MPTX1A8MV57 137 aa13.59□□□□□ -0.23
HERC3-205ENST00000426683 MED6O75586 246 aa13.59□□□□□ -0.23
HERC3-205ENST00000426683 IFNA21P01568 189 aa13.59□□□□□ -0.23
HERC3-205ENST00000426683 IAPPP10997 89 aa13.59□□□□□ -0.23
HERC3-205ENST00000426683 TMEM61Q8N0U2 210 aa13.59□□□□□ -0.23
HERC3-205ENST00000426683 MITD1Q8WV92 249 aa13.59□□□□□ -0.23
HERC3-205ENST00000426683 MAGT1Q9H0U3 335 aa13.59□□□□□ -0.23
HERC3-205ENST00000426683 SORL1Q92673 2214 aa13.59□□□□□ -0.23
HERC3-205ENST00000426683 SCGB2A1O75556 95 aa13.58□□□□□ -0.24
HERC3-205ENST00000426683 H2AFB2P0C5Z0 115 aa13.58□□□□□ -0.24
HERC3-205ENST00000426683 SLC25A4P12235 298 aa13.58□□□□□ -0.24
HERC3-205ENST00000426683 ETFRF1Q6IPR1 90 aa13.58□□□□□ -0.24
HERC3-205ENST00000426683 PRSS54Q6PEW0 395 aa13.58□□□□□ -0.24
HERC3-205ENST00000426683 TOMM20LQ6UXN7 152 aa13.58□□□□□ -0.24
HERC3-205ENST00000426683 ZNF600Q6ZNG1 722 aa13.58□□□□□ -0.24
HERC3-205ENST00000426683 OR10C1Q96KK4 312 aa13.58□□□□□ -0.24
HERC3-205ENST00000426683 DNAH9Q9NYC9 4486 aa13.57□□□□□ -0.24
HERC3-205ENST00000426683 SYNGR2O43760 224 aa13.57□□□□□ -0.24
HERC3-205ENST00000426683 SCAF4O95104 1147 aaKnown RBP13.57□□□□□ -0.24
HERC3-205ENST00000426683 IFNA4P05014 189 aa13.57□□□□□ -0.24
HERC3-205ENST00000426683 RND2P52198 227 aa13.57□□□□□ -0.24
HERC3-205ENST00000426683 ATP5IP56385 69 aaPredicted RBP13.57□□□□□ -0.24
HERC3-205ENST00000426683 CD81P60033 236 aa13.57□□□□□ -0.24
HERC3-205ENST00000426683 IFITM3Q01628 133 aa13.57□□□□□ -0.24
HERC3-205ENST00000426683 RBPMS2Q6ZRY4 209 aaKnown RBP13.57□□□□□ -0.24
HERC3-205ENST00000426683 ASCL2Q99929 193 aa13.57□□□□□ -0.24
HERC3-205ENST00000426683 PUS1Q9Y606 427 aaKnown RBP eCLIP13.57□□□□□ -0.24
HERC3-205ENST00000426683 TRAV30A0A087WSZ9 112 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 IGHV7-4-1A0A0J9YVY3 117 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 WRBO00258 174 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 FRMD6-AS1P0C7T7 363 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 IGHV4-30-4P0DP06 118 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 TIGITQ495A1 244 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 SLC16A13Q7RTY0 426 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 TMEM116Q8NCL8 245 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 CIB3Q96Q77 187 aaPredicted RBP13.56□□□□□ -0.24
HERC3-205ENST00000426683 NEURL2Q9BR09 285 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 SEC22CQ9BRL7 303 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 GINS3Q9BRX5 216 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 SMPXQ9UHP9 88 aa13.56□□□□□ -0.24
HERC3-205ENST00000426683 PAIP2BQ9ULR5 123 aaKnown RBP13.56□□□□□ -0.24
HERC3-205ENST00000426683 IGHV3-49A0A0A0MS15 119 aa13.55□□□□□ -0.24
HERC3-205ENST00000426683 TRAV14DV4A0A0A6YYC5 116 aa13.55□□□□□ -0.24
HERC3-205ENST00000426683 TRAV25A0A0B4J276 109 aa13.55□□□□□ -0.24
HERC3-205ENST00000426683 CD7P09564 240 aa13.55□□□□□ -0.24
HERC3-205ENST00000426683 IGLC1P0CG04 106 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms