RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 C1orf232A0A0U1RR37 186 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 ANGP03950 147 aaKnown RBP1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 LGALS1P09382 135 aaKnown RBP1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 CCL1P22362 96 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 PSMB8P28062 276 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 TPI1P60174 286 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 PPP1R1AQ13522 171 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 SLC36A2Q495M3 483 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 FAM78BQ5VT40 261 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 SMIM5Q71RC9 77 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 FAM9CQ8IZT9 166 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 UMODL1-AS1Q8N2C9 162 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 OR2T27Q8NH04 317 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 IMMP2LQ96T52 175 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 RETNLBQ9BQ08 111 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 DKKL1Q9UK85 242 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 ANAPC10Q9UM13 185 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 HTTP42858 3142 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 TEX15Q9BXT5 2789 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 ASPMQ8IZT6 3477 aa1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 URB1O60287 2271 aaKnown RBP1.31□□□□□ -2.2
RAB3GAP1-202ENST00000425393 IGF2RP11717 2491 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 KLRC4O43908 158 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 CIAO1O76071 339 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 REG1AP05451 166 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 SERPINA7P05543 415 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 COX5BP10606 129 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 EMP1P54849 157 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 MLLT11Q13015 90 aaPredicted RBP1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 TMEM155Q4W5P6 130 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 OPTNQ96CV9 577 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 DOHHQ9BU89 302 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 MAP1LC3AQ9H492 121 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 XAGE1AQ9HD64 81 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 PRELID1Q9Y255 219 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 RALGAPA2Q2PPJ7 1873 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 XIRP2A4UGR9 3374 aa1.3□□□□□ -2.2
RAB3GAP1-202ENST00000425393 ARAP2Q8WZ64 1704 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 IFT172Q9UG01 1749 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 PHIPQ8WWQ0 1821 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 FANCMQ8IYD8 2048 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 H7C2G1 150 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 SSNA1O43805 119 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 YEATS4O95619 227 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 TYMSP04818 313 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 LYNX1P0DP58 116 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 MAGEA12P43365 314 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 SLCO1A2P46721 670 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 RPL28P46779 137 aaKnown RBP1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 AKR1C1Q04828 323 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 NUMA1Q14980 2115 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 TNFAIP8L3Q5GJ75 292 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 KTN1-AS1Q86SY8 53 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 RNF133Q8WVZ7 376 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 HDHD2Q9H0R4 259 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 CSPG4Q6UVK1 2322 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 DNAH14Q0VDD8 3507 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 NFAT5O94916 1531 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 STAB1Q9NY15 2570 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 IGSF10Q6WRI0 2623 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 DDX60LQ5H9U9 1706 aaKnown RBP1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 MAST2Q6P0Q8 1798 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 MAP2P11137 1827 aaKnown RBP1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 NAV1Q8NEY1 1877 aa1.29□□□□□ -2.2
RAB3GAP1-202ENST00000425393 CCDC88CQ9P219 2028 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 HIVEP3Q5T1R4 2406 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 FLNCQ14315 2725 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 CFAP46Q8IYW2 2715 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 F8W036 122 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 LST1O00453 97 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 PLA2G10O15496 165 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 GPX2P18283 190 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 RAB14P61106 215 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 AP1S1P61966 158 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 FAM151BQ6UXP7 276 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 ZNF550Q7Z398 422 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 SLC22A24Q8N4F4 322 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 C9orf163Q8N9P6 203 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 Q96M85 177 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 LLPHQ9BRT6 129 aaKnown RBP1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 GPR84Q9NQS5 396 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 TIMM9Q9Y5J7 89 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 IBTKQ9P2D0 1353 aaPredicted RBP1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 DUOX1Q9NRD9 1551 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 DOT1LQ8TEK3 1739 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 SIPA1L1O43166 1804 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 TSC2P49815 1807 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 CEP295Q9C0D2 2601 aa1.28□□□□□ -2.2
RAB3GAP1-202ENST00000425393 CDH23Q9H251 3354 aa1.28□□□□□ -2.21
RAB3GAP1-202ENST00000425393 SPTBN1Q01082 2364 aaKnown RBP1.27□□□□□ -2.21
RAB3GAP1-202ENST00000425393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.27□□□□□ -2.219e-7■■■■■ 31.1
RAB3GAP1-202ENST00000425393 MED13LQ71F56 2210 aa1.27□□□□□ -2.21
RAB3GAP1-202ENST00000425393 VPS8Q8N3P4 1428 aa1.27□□□□□ -2.21
RAB3GAP1-202ENST00000425393 MEIKINA0A087WXM9 373 aa1.27□□□□□ -2.21
RAB3GAP1-202ENST00000425393 A0A0A6YYH2 397 aa1.27□□□□□ -2.21
RAB3GAP1-202ENST00000425393 A0A0D9SEW6 157 aa1.27□□□□□ -2.21
RAB3GAP1-202ENST00000425393 IGHV1-69-2A0A0G2JMI3 117 aa1.27□□□□□ -2.21
RAB3GAP1-202ENST00000425393 A6NJ64 397 aa1.27□□□□□ -2.21
RAB3GAP1-202ENST00000425393 DISC1C4P0D8 188 aa1.27□□□□□ -2.21
RAB3GAP1-202ENST00000425393 H3BT86 120 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms