RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 VDAC1P21796 283 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 CRYGSP22914 178 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 GATA2P23769 480 aaPredicted RBP2.24□□□□□ -2.05
PMS1-209ENST00000424059 PRSS3P35030 304 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 SAA4P35542 130 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 RBMXP38159 391 aaKnown RBP2.24□□□□□ -2.05
PMS1-209ENST00000424059 SUB1P53999 127 aaKnown RBP eCLIP2.24□□□□□ -2.05
PMS1-209ENST00000424059 H2BFSP57053 126 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 GNB2P62879 340 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 PMCHL1Q16048 86 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 MPV17LQ2QL34 196 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 VMA21Q3ZAQ7 101 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 ZC2HC1BQ5TFG8 222 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 SPATA12Q7Z6I5 190 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 PRR15Q8IV56 129 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 PCP2Q8IVA1 136 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 SFTPA2Q8IWL1 248 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 ANKRD29Q8N6D5 301 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 C3orf56Q8N813 242 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 OR10P1Q8NGE3 313 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 NT5CQ8TCD5 201 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 SCGB1C1Q8TD33 95 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 MRPL24Q96A35 216 aaKnown RBP2.24□□□□□ -2.05
PMS1-209ENST00000424059 AGPAT4-IT1Q9H0P7 198 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 CYTL1Q9NRR1 136 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 PRO0461Q9UI25 63 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 VSIG4Q9Y279 399 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 NEUROG3Q9Y4Z2 214 aa2.24□□□□□ -2.05
PMS1-209ENST00000424059 GPATCH8Q9UKJ3 1502 aaKnown RBP2.23□□□□□ -2.05
PMS1-209ENST00000424059 TDRD15B5MCY1 1934 aaKnown RBP2.23□□□□□ -2.05
PMS1-209ENST00000424059 C10orf71Q711Q0 1435 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 NUP210Q8TEM1 1887 aaPredicted RBP2.23□□□□□ -2.05
PMS1-209ENST00000424059 TRAV27A0A087WT01 109 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 A0A096LPK6 155 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 A0A1B0GXF2 115 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 NAP1L6A6NFF2 107 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 KNCNA6PVL3 124 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 SYS1-DBNDD2H3BUS1 97 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 H3BUT2 72 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 WISP2O76076 250 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 GYPAP02724 150 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 FGF1P05230 155 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 OR9G9P0C7N8 305 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 INSL3P51460 131 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 HERV-K104P61576 105 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 RPS24P62847 133 aaKnown RBP2.23□□□□□ -2.05
PMS1-209ENST00000424059 ELOCQ15369 112 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 MS4A13Q5J8X5 152 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 MRPL2Q5T653 305 aaKnown RBP2.23□□□□□ -2.05
PMS1-209ENST00000424059 PVRIGQ6DKI7 326 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 MORN3Q6PF18 240 aaPredicted RBP2.23□□□□□ -2.05
PMS1-209ENST00000424059 ZNF493Q6ZR52 646 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 DNM1P46Q6ZS02 220 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 AAED1Q7RTV5 226 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 SH2D6Q7Z4S9 175 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 TMEM179BQ7Z7N9 219 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 TRAPPC6BQ86SZ2 158 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 SMIM29Q86T20 159 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 CMTM2Q8TAZ6 248 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 TVP23CQ96ET8 276 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 BORCS8Q96FH0 119 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 ZNF799Q96GE5 643 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 GPX7Q96SL4 187 aaPredicted RBP2.23□□□□□ -2.05
PMS1-209ENST00000424059 MRPL20Q9BYC9 149 aaKnown RBP2.23□□□□□ -2.05
PMS1-209ENST00000424059 COMMD5Q9GZQ3 224 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 AICDAQ9GZX7 198 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 ARRDC1-AS1Q9H2J1 176 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 CACNG5Q9UF02 275 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 LAMTOR3Q9UHA4 124 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 KLK5Q9Y337 293 aaPredicted RBP2.23□□□□□ -2.05
PMS1-209ENST00000424059 COQ4Q9Y3A0 265 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 DNAJC15Q9Y5T4 150 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 KIF26AQ9ULI4 1882 aaPredicted RBP2.23□□□□□ -2.05
PMS1-209ENST00000424059 PXDNLA1KZ92 1463 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 DOCK2Q92608 1830 aa2.23□□□□□ -2.05
PMS1-209ENST00000424059 PREX1Q8TCU6 1659 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 HECW1Q76N89 1606 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 EIF2AK4Q9P2K8 1649 aaKnown RBP2.22□□□□□ -2.05
PMS1-209ENST00000424059 ALKQ9UM73 1620 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 TRBV19A0A075B6N1 114 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 C3orf85A0A1B0GTC6 90 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 PLAC8L1A1L4L8 177 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 FAM220BPB1ANY3 271 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 H3BMG7 143 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 FCN1O00602 326 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 LYZL6O75951 148 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 HOXB7P09629 217 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 IGHV4-30-4P0DP06 118 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 CBLN1P23435 193 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 HLA-DMBP28068 263 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 RPL22P35268 128 aaKnown RBP2.22□□□□□ -2.05
PMS1-209ENST00000424059 ASIPP42127 132 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 PSMB3P49720 205 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 LIM2P55344 173 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 TAS2R45P59539 299 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 RPS11P62280 158 aaKnown RBP eCLIP2.22□□□□□ -2.05
PMS1-209ENST00000424059 HBG1P69891 147 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 HBG2P69892 147 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 LINC00303Q3SY05 128 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 ETDBQ3ZM63 59 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms