RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 CLEC19AQ6UXS0 136 aa7.44□□□□□ -1.22
HERC3-204ENST00000422770 OR52E5Q8NH55 327 aa7.44□□□□□ -1.22
HERC3-204ENST00000422770 EEF1AKMT3Q96AZ1 226 aa7.44□□□□□ -1.22
HERC3-204ENST00000422770 CIB3Q96Q77 187 aaPredicted RBP7.44□□□□□ -1.22
HERC3-204ENST00000422770 PRR25Q96S07 402 aa7.44□□□□□ -1.22
HERC3-204ENST00000422770 RAB40CQ96S21 281 aa7.44□□□□□ -1.22
HERC3-204ENST00000422770 PSENENQ9NZ42 101 aa7.44□□□□□ -1.22
HERC3-204ENST00000422770 ZMAT5Q9UDW3 170 aaKnown RBP7.44□□□□□ -1.22
HERC3-204ENST00000422770 TRBV9A0A0B4J1U6 114 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 IGSF23A1L1A6 192 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 E5RGE8 158 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 BRI3O95415 125 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 IFNA10P01566 189 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 NPY1RP25929 384 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 ARL3P36405 182 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 NUP62P37198 522 aaPredicted RBP7.43□□□□□ -1.22
HERC3-204ENST00000422770 EIF2B2P49770 351 aaKnown RBP7.43□□□□□ -1.22
HERC3-204ENST00000422770 ID3Q02535 119 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 SPANXN5Q5MJ07 72 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 HSD17B13Q7Z5P4 300 aaPredicted RBP7.43□□□□□ -1.22
HERC3-204ENST00000422770 HAPLN4Q86UW8 402 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 STX12Q86Y82 276 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 UBAC2Q8NBM4 344 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 SLC24A4Q8NFF2 622 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 MISP3Q96FF7 219 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 FANCD2OSQ96PS1 177 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 SRSF8Q9BRL6 282 aaKnown RBP7.43□□□□□ -1.22
HERC3-204ENST00000422770 HIPK2Q9H2X6 1198 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 NDUFA4L2Q9NRX3 87 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 THYN1Q9P016 225 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 CACFD1Q9UGQ2 172 aa7.43□□□□□ -1.22
HERC3-204ENST00000422770 IGLV11-55A0A075B6I3 123 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.42□□□□□ -1.22
HERC3-204ENST00000422770 WI2-2373I1.2A0A1W2PRP0 233 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 ZNF320A2RRD8 509 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 MFSD2BA6NFX1 497 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 FAM24AA6NFZ4 105 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 BMPR1BO00238 502 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 TSC22D2O75157 780 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 TMEM50AO95807 157 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 CRYGCP07315 174 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 METTL15P1P0C7V9 234 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 SLC25A4P12235 298 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 GPR183P32249 361 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 INSL3P51460 131 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 AP2S1P53680 142 aaPredicted RBP7.42□□□□□ -1.22
HERC3-204ENST00000422770 EWSR1Q01844 656 aaKnown RBP eCLIP7.42□□□□□ -1.22
HERC3-204ENST00000422770 WT1-ASQ06250 92 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 OR8G2PQ6IF36 304 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 ACSM6Q6P461 480 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 NOXA1Q86UR1 476 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 OR11H4Q8NGC9 324 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 OR9G4Q8NGQ1 327 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 PINX1Q96BK5 328 aaKnown RBP7.42□□□□□ -1.22
HERC3-204ENST00000422770 CXorf58Q96LI9 332 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 C11orf1Q9H5F2 150 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 LYRM2Q9NU23 88 aaPredicted RBP7.42□□□□□ -1.22
HERC3-204ENST00000422770 PEMTQ9UBM1 199 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 STRAPQ9Y3F4 350 aaKnown RBP7.42□□□□□ -1.22
HERC3-204ENST00000422770 NOTCH3Q9UM47 2321 aa7.42□□□□□ -1.22
HERC3-204ENST00000422770 TRBV7-1A0A0A6YYK4 115 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 IGHV3-35A0A0C4DH35 117 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 RNF222A6NCQ9 220 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 C15orf62A8K5M9 175 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 GGCTO75223 188 aaKnown RBP7.41□□□□□ -1.22
HERC3-204ENST00000422770 CST7O76096 145 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 OR2C1O95371 312 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 RNASE2P10153 161 aaKnown RBP7.41□□□□□ -1.22
HERC3-204ENST00000422770 SNCAP37840 140 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 P2RY1P47900 373 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 PAX9P55771 341 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 ERHP84090 104 aaKnown RBP7.41□□□□□ -1.22
HERC3-204ENST00000422770 EGFEM1PQ0D2K5 195 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 Q56UQ5 140 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 FAM209BQ5JX69 171 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 ZNF546Q86UE3 836 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 LILRB2Q8N423 598 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 OR2C3Q8N628 320 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 TMEM217Q8N7C4 229 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 INO80EQ8NBZ0 244 aaPredicted RBP7.41□□□□□ -1.22
HERC3-204ENST00000422770 DYNLRB2Q8TF09 96 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 CCDC140Q96MF4 163 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 SMIM3Q9BZL3 60 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 TNFSF18Q9UNG2 199 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 ZNF256Q9Y2P7 627 aaPredicted RBP7.41□□□□□ -1.22
HERC3-204ENST00000422770 HSPB11Q9Y547 144 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 F11RQ9Y624 299 aaKnown RBP7.41□□□□□ -1.22
HERC3-204ENST00000422770 CMYA5Q8N3K9 4069 aa7.41□□□□□ -1.22
HERC3-204ENST00000422770 SMCO3A2RU48 225 aa7.4□□□□□ -1.22
HERC3-204ENST00000422770 OR2T8A6NH00 312 aa7.4□□□□□ -1.22
HERC3-204ENST00000422770 K7EIL1 84 aa7.4□□□□□ -1.22
HERC3-204ENST00000422770 IFNA4P05014 189 aa7.4□□□□□ -1.22
HERC3-204ENST00000422770 LYL1P12980 280 aa7.4□□□□□ -1.22
HERC3-204ENST00000422770 RPL12P30050 165 aaKnown RBP7.4□□□□□ -1.22
HERC3-204ENST00000422770 HTR2BP41595 481 aa7.4□□□□□ -1.22
HERC3-204ENST00000422770 TAS2R30P59541 319 aa7.4□□□□□ -1.22
HERC3-204ENST00000422770 RAB11AP62491 216 aa7.4□□□□□ -1.22
HERC3-204ENST00000422770 RPP30P78346 268 aaKnown RBP7.4□□□□□ -1.22
HERC3-204ENST00000422770 SLC38A11Q08AI6 406 aa7.4□□□□□ -1.22
HERC3-204ENST00000422770 KLF5Q13887 457 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms