RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ZNF660Q6AZW8 331 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-206ENST00000421141 FAM223AQ8IWN6 122 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 H7C1H1 209 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 PRTN3P24158 256 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 ICAM4Q14773 271 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 LYPD2Q6UXB3 125 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 DUSP14O95147 198 aaKnown RBP8.86□□□□□ -0.99
PTCH1-206ENST00000421141 GATA4P43694 442 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 TMEM262E9PQX1 116 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 NDUFB4O95168 129 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 SELLP14151 372 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 SULT1A2P50226 295 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 CR1LQ2VPA4 569 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 FAM74A4Q5TZK3 123 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 SPSB3Q6PJ21 355 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 LCNL1Q6ZST4 164 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 RNF166Q96A37 237 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-206ENST00000421141 TRGV2A0A075B6R0 118 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 M0R2Z0 102 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 NBEAP1P0C6P0 100 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 FOSL1P15407 271 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 C5orf64Q2M2E5 130 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 SPOCK3Q9BQ16 436 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 KLHDC3Q9BQ90 382 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 MLNRO43193 412 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 WT1P19544 449 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-206ENST00000421141 LEPP41159 167 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 FOXL2NBQ6ZUU3 175 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 CHAC2Q8WUX2 184 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 CLDN16Q9Y5I7 305 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 ETV2O00321 342 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-206ENST00000421141 RNASE4P34096 147 aaKnown RBP8.85□□□□□ -0.99
PTCH1-206ENST00000421141 LOC389332A0A1B0GUA5 103 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 NPCDR1Q9BY65 106 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 MBNL3Q9NUK0 354 aaKnown RBP8.85□□□□□ -0.99
PTCH1-206ENST00000421141 PIP4P2Q8N4L2 257 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 IGHV1-69DA0A0B4J2H0 117 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 IGHV1-69P01742 117 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 OTX1P32242 354 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-206ENST00000421141 MRPL54Q6P161 138 aaKnown RBP8.85□□□□□ -0.99
PTCH1-206ENST00000421141 SIGLEC15Q6ZMC9 328 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 HIST1H2BAQ96A08 127 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 ADAMTS20P59510 1910 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 RAB24Q969Q5 203 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 NOTCH2Q04721 2471 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 HTN3P15516 51 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 FAM89BQ8N5H3 189 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 BEND2Q8NDZ0 799 aa8.85□□□□□ -0.99
PTCH1-206ENST00000421141 IGKV1-27A0A075B6S5 117 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 IGFBP2P18065 325 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 HERPUD1Q15011 391 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 PSMG3Q9BT73 122 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-206ENST00000421141 IGKV1D-17A0A075B6S4 117 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 PRCDQ00LT1 54 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 Q8TCH9 128 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 C2CD4CQ8TF44 421 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 SLC50A1Q9BRV3 221 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 AP5S1Q9NUS5 200 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 PTPRBP23467 1997 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 FBLL1A6NHQ2 334 aaKnown RBP8.84□□□□□ -0.99
PTCH1-206ENST00000421141 PSPNO60542 156 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 SCO1O75880 301 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 SIGIRRQ6IA17 410 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 RNF125Q96EQ8 232 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 MIEN1Q9BRT3 115 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.84□□□□□ -0.99
PTCH1-206ENST00000421141 TMEM42Q69YG0 159 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 OR1P1Q8NH06 330 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 IGHV3OR16-8A0A075B7F1 116 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 BTF3P20290 206 aaKnown RBP8.84□□□□□ -0.99
PTCH1-206ENST00000421141 C9orf62Q8N4C0 152 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 TMEM101Q96IK0 257 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 IGLV1-44P01699 117 aa8.84□□□□□ -0.99
PTCH1-206ENST00000421141 NUDT3O95989 172 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 OR52E5Q8NH55 327 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 FMC1Q96HJ9 113 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 KIR2DL4Q99706 377 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 LINC00527Q9UJ94 153 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 PPP1R17O96001 155 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 GCGP01275 180 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 IL6RP08887 468 aaPredicted RBP8.83□□□□□ -1
PTCH1-206ENST00000421141 RTBDNQ9BSG5 229 aaPredicted RBP8.83□□□□□ -1
PTCH1-206ENST00000421141 E9PQ18 207 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 ASIPP42127 132 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 DTX2Q86UW9 622 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 SGK494Q96LW2 274 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 PRR32B1ATL7 298 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 C9JCJ5 164 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 H3BQ15 152 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 AURKAIP1Q9NWT8 199 aaPredicted RBP8.83□□□□□ -1
PTCH1-206ENST00000421141 FUT9Q9Y231 359 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 H0YJW9 148 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 H3BTX0 84 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 FABP4P15090 132 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 SPTBN4Q9H254 2564 aa8.83□□□□□ -1
PTCH1-206ENST00000421141 K7EM74 188 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 RUSC1-AS1Q66K80 236 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 LAIR2Q6ISS4 152 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 VAMP8Q9BV40 100 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 IGKV1-12A0A0C4DH73 117 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms