RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 CNPY1Q3B7I2 92 aa16.12■□□□□ 0.17
CPNE1-211ENST00000420363 ANKRD55Q3KP44 614 aa16.12■□□□□ 0.17
CPNE1-211ENST00000420363 DUSP18Q8NEJ0 188 aa16.12■□□□□ 0.17
CPNE1-211ENST00000420363 SLC24A4Q8NFF2 622 aa16.12■□□□□ 0.17
CPNE1-211ENST00000420363 CCDC32Q9BV29 185 aa16.12■□□□□ 0.17
CPNE1-211ENST00000420363 MLXQ9UH92 298 aa16.12■□□□□ 0.17
CPNE1-211ENST00000420363 TMED3Q9Y3Q3 217 aa16.12■□□□□ 0.17
CPNE1-211ENST00000420363 OPRK1P41145 380 aa16.11■□□□□ 0.17
CPNE1-211ENST00000420363 NOXA1Q86UR1 476 aa16.11■□□□□ 0.17
CPNE1-211ENST00000420363 RNASEH2CQ8TDP1 164 aaKnown RBP16.11■□□□□ 0.17
CPNE1-211ENST00000420363 ZNF414Q96IQ9 312 aa16.11■□□□□ 0.17
CPNE1-211ENST00000420363 OR10C1Q96KK4 312 aa16.11■□□□□ 0.17
CPNE1-211ENST00000420363 HIPK2Q9H2X6 1198 aa16.11■□□□□ 0.17
CPNE1-211ENST00000420363 TRAV25A0A0B4J276 109 aa16.1■□□□□ 0.17
CPNE1-211ENST00000420363 RPS10-NUDT3A0A1W2PQS6 291 aa16.1■□□□□ 0.17
CPNE1-211ENST00000420363 C3orf84H3BNL1 204 aa16.1■□□□□ 0.17
CPNE1-211ENST00000420363 FRMD6-AS1P0C7T7 363 aa16.1■□□□□ 0.17
CPNE1-211ENST00000420363 IGHV4-30-4P0DP06 118 aa16.1■□□□□ 0.17
CPNE1-211ENST00000420363 BTNL8Q6UX41 500 aa16.1■□□□□ 0.17
CPNE1-211ENST00000420363 TMEM61Q8N0U2 210 aa16.1■□□□□ 0.17
CPNE1-211ENST00000420363 FNDC4Q9H6D8 234 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-211ENST00000420363 ZNF785A8K8V0 405 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 FAM90A26D6RGX4 464 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 PITX3O75364 302 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 SCGB2A1O75556 95 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 IGHV3-48P01763 117 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 NPY1RP25929 384 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 OR4X1Q8NH49 305 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 OR1S1Q8NH92 325 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 DTD1Q8TEA8 209 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 S100ZQ8WXG8 99 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 C19orf73Q9NVV2 129 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 U3KQ87 197 aa16.09■□□□□ 0.17
CPNE1-211ENST00000420363 LINC00854A0A1B0GVQ3 168 aa16.08■□□□□ 0.16
CPNE1-211ENST00000420363 ATP5IP56385 69 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-211ENST00000420363 WDR89Q96FK6 387 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-211ENST00000420363 C9orf170A2RU37 121 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 LYRM1O43325 122 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 CLN5O75503 358 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 NXPH3O95157 252 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 SLC25A4P12235 298 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 CD81P60033 236 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 DHRS2Q13268 280 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 TMEM170AQ8WVE7 144 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 C20orf24Q9BUV8 137 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 RBKSQ9H477 322 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 PTTG2Q9NZH5 202 aa16.07■□□□□ 0.16
CPNE1-211ENST00000420363 PLA2G10O15496 165 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 TMEM50AO95807 157 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 OR4E1P0C645 316 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 GUCA2BQ16661 112 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 ETFRF1Q6IPR1 90 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 ZNF600Q6ZNG1 722 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 LYG2Q86SG7 212 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 COQ8AQ8NI60 647 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 NEURL2Q9BR09 285 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 GINS3Q9BRX5 216 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 FLVCR2Q9UPI3 526 aa16.06■□□□□ 0.16
CPNE1-211ENST00000420363 TRAV30A0A087WSZ9 112 aa16.05■□□□□ 0.16
CPNE1-211ENST00000420363 RBPMS2Q6ZRY4 209 aaKnown RBP16.05■□□□□ 0.16
CPNE1-211ENST00000420363 SLC16A13Q7RTY0 426 aa16.05■□□□□ 0.16
CPNE1-211ENST00000420363 TMEM116Q8NCL8 245 aa16.05■□□□□ 0.16
CPNE1-211ENST00000420363 SPAG8Q99932 426 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-211ENST00000420363 IGHV7-4-1A0A0J9YVY3 117 aa16.04■□□□□ 0.16
CPNE1-211ENST00000420363 TSPAN4O14817 238 aa16.04■□□□□ 0.16
CPNE1-211ENST00000420363 YIF1AO95070 293 aa16.04■□□□□ 0.16
CPNE1-211ENST00000420363 LAMTOR1Q6IAA8 161 aa16.04■□□□□ 0.16
CPNE1-211ENST00000420363 SBSPONQ8IVN8 264 aa16.04■□□□□ 0.16
CPNE1-211ENST00000420363 C20orf85Q9H1P6 137 aa16.04■□□□□ 0.16
CPNE1-211ENST00000420363 ZFAND3Q9H8U3 227 aa16.04■□□□□ 0.16
CPNE1-211ENST00000420363 MRPL36Q9P0J6 103 aaKnown RBP16.04■□□□□ 0.16
CPNE1-211ENST00000420363 SMPXQ9UHP9 88 aa16.04■□□□□ 0.16
CPNE1-211ENST00000420363 IGHV3OR16-8A0A075B7F1 116 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 MED6O75586 246 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 IFNA10P01566 189 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 HOXB5P09067 269 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 CD7P09564 240 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 ANXA7P20073 488 aaKnown RBP16.03■□□□□ 0.16
CPNE1-211ENST00000420363 BMI1P35226 326 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 GGNBP1Q5YKI7 109 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 PRSS54Q6PEW0 395 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 TOMM20LQ6UXN7 152 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 OR1S2Q8NGQ3 325 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 CIB3Q96Q77 187 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-211ENST00000420363 BATF3Q9NR55 127 aa16.03■□□□□ 0.16
CPNE1-211ENST00000420363 PUS1Q9Y606 427 aaKnown RBP eCLIP16.03■□□□□ 0.16
CPNE1-211ENST00000420363 SCAF4O95104 1147 aaKnown RBP16.02■□□□□ 0.16
CPNE1-211ENST00000420363 C4orf46Q504U0 113 aa16.02■□□□□ 0.16
CPNE1-211ENST00000420363 WDR12Q9GZL7 423 aaKnown RBP16.02■□□□□ 0.16
CPNE1-211ENST00000420363 HUWE1Q7Z6Z7 4374 aaKnown RBP16.02■□□□□ 0.16
CPNE1-211ENST00000420363 TRAV14DV4A0A0A6YYC5 116 aa16.01■□□□□ 0.15
CPNE1-211ENST00000420363 CHEK1O14757 476 aa16.01■□□□□ 0.15
CPNE1-211ENST00000420363 ZNF207O43670 478 aaKnown RBP16.01■□□□□ 0.15
CPNE1-211ENST00000420363 IGKV1-17P01599 117 aa16.01■□□□□ 0.15
CPNE1-211ENST00000420363 CD5P06127 495 aa16.01■□□□□ 0.15
CPNE1-211ENST00000420363 IGLC1P0CG04 106 aa16.01■□□□□ 0.15
CPNE1-211ENST00000420363 RND2P52198 227 aa16.01■□□□□ 0.15
CPNE1-211ENST00000420363 MLANAQ16655 118 aa16.01■□□□□ 0.15
CPNE1-211ENST00000420363 OR52B4Q8NGK2 314 aa16.01■□□□□ 0.15
CPNE1-211ENST00000420363 MUC7Q8TAX7 377 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms