RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 C2orf83Q53S99 150 aa15.41■□□□□ 0.06
PKNOX1-202ENST00000418336 TMED4Q7Z7H5 227 aa15.41■□□□□ 0.06
PKNOX1-202ENST00000418336 RCHY1Q96PM5 261 aa15.41■□□□□ 0.06
PKNOX1-202ENST00000418336 DYNC2H1Q8NCM8 4307 aaKnown RBP15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 CORTO00230 105 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 NUPL2O15504 423 aaKnown RBP15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 NXPH3O95157 252 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 SFT2D2O95562 160 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 SULT1A3P0DMM9 295 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 SULT1A4P0DMN0 295 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 RELQ04864 619 aaPredicted RBP15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 PPP1R1AQ13522 171 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 GUCA2BQ16661 112 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 TOMM20LQ6UXN7 152 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 LGI3Q8N145 548 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 CITED4Q96RK1 184 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 SMPXQ9UHP9 88 aa15.4■□□□□ 0.06
PKNOX1-202ENST00000418336 IGHV7-4-1A0A0J9YVY3 117 aa15.39■□□□□ 0.05
PKNOX1-202ENST00000418336 A0A1B0GU03 582 aa15.39■□□□□ 0.05
PKNOX1-202ENST00000418336 CHEK1O14757 476 aa15.39■□□□□ 0.05
PKNOX1-202ENST00000418336 TSPAN4O14817 238 aa15.39■□□□□ 0.05
PKNOX1-202ENST00000418336 HTR2BP41595 481 aa15.39■□□□□ 0.05
PKNOX1-202ENST00000418336 TNFRSF9Q07011 255 aa15.39■□□□□ 0.05
PKNOX1-202ENST00000418336 SMCO1Q147U7 214 aa15.39■□□□□ 0.05
PKNOX1-202ENST00000418336 DUSP18Q8NEJ0 188 aa15.39■□□□□ 0.05
PKNOX1-202ENST00000418336 OR4X1Q8NH49 305 aa15.39■□□□□ 0.05
PKNOX1-202ENST00000418336 C20orf24Q9BUV8 137 aa15.39■□□□□ 0.05
PKNOX1-202ENST00000418336 GNG7O60262 68 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 CLN5O75503 358 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 NDUFB6O95139 128 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 IGKV1-17P01599 117 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 IL7P13232 177 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 NPBWR1P48145 328 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 SUB1P53999 127 aaKnown RBP eCLIP15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 SRPXP78539 464 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 RBMS2Q15434 407 aaKnown RBP15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 FAM90A2PQ658T7 463 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 LILRB2Q8N423 598 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 SLC24A4Q8NFF2 622 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 RNF2Q99496 336 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 ENY2Q9NPA8 101 aa15.38■□□□□ 0.05
PKNOX1-202ENST00000418336 NBEAL2Q6ZNJ1 2754 aa15.37■□□□□ 0.05
PKNOX1-202ENST00000418336 DUXBA0A1W2PPF3 345 aa15.37■□□□□ 0.05
PKNOX1-202ENST00000418336 OR11H12B2RN74 326 aa15.37■□□□□ 0.05
PKNOX1-202ENST00000418336 APOHP02749 345 aaPredicted RBP15.37■□□□□ 0.05
PKNOX1-202ENST00000418336 ANXA3P12429 323 aa15.37■□□□□ 0.05
PKNOX1-202ENST00000418336 RBKSQ9H477 322 aa15.37■□□□□ 0.05
PKNOX1-202ENST00000418336 SRD5A3Q9H8P0 318 aa15.37■□□□□ 0.05
PKNOX1-202ENST00000418336 FLVCR2Q9UPI3 526 aa15.37■□□□□ 0.05
PKNOX1-202ENST00000418336 RYR2Q92736 4967 aa15.37■□□□□ 0.05
PKNOX1-202ENST00000418336 NAP1L6A6NFF2 107 aa15.36■□□□□ 0.05
PKNOX1-202ENST00000418336 PLA2G10O15496 165 aa15.36■□□□□ 0.05
PKNOX1-202ENST00000418336 OPRK1P41145 380 aa15.36■□□□□ 0.05
PKNOX1-202ENST00000418336 PRSS54Q6PEW0 395 aa15.36■□□□□ 0.05
PKNOX1-202ENST00000418336 CENPSQ8N2Z9 138 aa15.36■□□□□ 0.05
PKNOX1-202ENST00000418336 SPAG8Q99932 426 aaPredicted RBP15.36■□□□□ 0.05
PKNOX1-202ENST00000418336 RHPN1-AS1Q9BWJ2 59 aa15.36■□□□□ 0.05
PKNOX1-202ENST00000418336 VSIRQ9H7M9 311 aa15.36■□□□□ 0.05
PKNOX1-202ENST00000418336 HEYLQ9NQ87 328 aaPredicted RBP15.36■□□□□ 0.05
PKNOX1-202ENST00000418336 PUS1Q9Y606 427 aaKnown RBP eCLIP15.36■□□□□ 0.05
PKNOX1-202ENST00000418336 CEBPZOSA8MTT3 80 aa15.35■□□□□ 0.05
PKNOX1-202ENST00000418336 IGLC1P0CG04 106 aa15.35■□□□□ 0.05
PKNOX1-202ENST00000418336 SLC25A6P12236 298 aa15.35■□□□□ 0.05
PKNOX1-202ENST00000418336 ODF3L2Q3SX64 289 aa15.35■□□□□ 0.05
PKNOX1-202ENST00000418336 ZNF600Q6ZNG1 722 aa15.35■□□□□ 0.05
PKNOX1-202ENST00000418336 TMEM116Q8NCL8 245 aa15.35■□□□□ 0.05
PKNOX1-202ENST00000418336 OR52B4Q8NGK2 314 aa15.35■□□□□ 0.05
PKNOX1-202ENST00000418336 RNASEH2CQ8TDP1 164 aaKnown RBP15.35■□□□□ 0.05
PKNOX1-202ENST00000418336 EDA2RQ9HAV5 297 aa15.35■□□□□ 0.05
PKNOX1-202ENST00000418336 CACFD1Q9UGQ2 172 aa15.35■□□□□ 0.05
PKNOX1-202ENST00000418336 IGHV3-49A0A0A0MS15 119 aa15.34■□□□□ 0.05
PKNOX1-202ENST00000418336 VAMP1P23763 118 aa15.34■□□□□ 0.05
PKNOX1-202ENST00000418336 NPY1RP25929 384 aa15.34■□□□□ 0.05
PKNOX1-202ENST00000418336 UBE2MP61081 183 aaKnown RBP15.34■□□□□ 0.05
PKNOX1-202ENST00000418336 TRIQKQ629K1 86 aa15.34■□□□□ 0.05
PKNOX1-202ENST00000418336 RBPMS2Q6ZRY4 209 aaKnown RBP15.34■□□□□ 0.05
PKNOX1-202ENST00000418336 DTD1Q8TEA8 209 aa15.34■□□□□ 0.05
PKNOX1-202ENST00000418336 HIPK2Q9H2X6 1198 aa15.34■□□□□ 0.05
PKNOX1-202ENST00000418336 TUBA4BQ9H853 241 aa15.34■□□□□ 0.05
PKNOX1-202ENST00000418336 TRAV14DV4A0A0A6YYC5 116 aa15.33■□□□□ 0.04
PKNOX1-202ENST00000418336 C9orf170A2RU37 121 aa15.33■□□□□ 0.04
PKNOX1-202ENST00000418336 A6NHS1 94 aa15.33■□□□□ 0.04
PKNOX1-202ENST00000418336 YIF1AO95070 293 aa15.33■□□□□ 0.04
PKNOX1-202ENST00000418336 TIGITQ495A1 244 aa15.33■□□□□ 0.04
PKNOX1-202ENST00000418336 SLC16A13Q7RTY0 426 aa15.33■□□□□ 0.04
PKNOX1-202ENST00000418336 ZMAT4Q9H898 229 aa15.33■□□□□ 0.04
PKNOX1-202ENST00000418336 RETNQ9HD89 108 aa15.33■□□□□ 0.04
PKNOX1-202ENST00000418336 SACSQ9NZJ4 4579 aa15.33■□□□□ 0.04
PKNOX1-202ENST00000418336 IGHV3OR16-13A0A075B7E8 117 aa15.32■□□□□ 0.04
PKNOX1-202ENST00000418336 IGHV3-74A0A0B4J1X5 117 aa15.32■□□□□ 0.04
PKNOX1-202ENST00000418336 ST8SIA2Q92186 375 aa15.32■□□□□ 0.04
PKNOX1-202ENST00000418336 SPATA25Q9BR10 227 aa15.32■□□□□ 0.04
PKNOX1-202ENST00000418336 C7orf50Q9BRJ6 194 aaKnown RBP15.32■□□□□ 0.04
PKNOX1-202ENST00000418336 U3KQ87 197 aa15.32■□□□□ 0.04
PKNOX1-202ENST00000418336 LINC00854A0A1B0GVQ3 168 aa15.31■□□□□ 0.04
PKNOX1-202ENST00000418336 SLC25A4P12235 298 aa15.31■□□□□ 0.04
PKNOX1-202ENST00000418336 RND2P52198 227 aa15.31■□□□□ 0.04
PKNOX1-202ENST00000418336 GGNBP1Q5YKI7 109 aa15.31■□□□□ 0.04
PKNOX1-202ENST00000418336 TMED3Q9Y3Q3 217 aa15.31■□□□□ 0.04
PKNOX1-202ENST00000418336 LYSTQ99698 3801 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms