RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 DCANP1Q8TF63 244 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TMEM230Q96A57 120 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SEC22AQ96IW7 307 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 ZNF2Q9BSG1 426 aaPredicted RBP5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 XCL2Q9UBD3 114 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SSR3Q9UNL2 185 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
HLA-DPA1-241ENST00000417724 DNAH17Q9UFH2 4485 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 MEIS3P1A6NDR6 274 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SMIM9A6NGZ8 99 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 C16orf90A8MZG2 172 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 CORTO00230 105 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SDC2P34741 201 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 PPP5CP53041 499 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TAS2R46P59540 309 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SNRPD3P62318 126 aaKnown RBP5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 PSMG4Q5JS54 123 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 IDNKQ5T6J7 187 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 MAPKAPK5-AS1Q8N8E1 139 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 OR5H6Q8NGV6 325 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 OR5H2Q8NGV7 314 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SLC25A38Q96DW6 304 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 NEU1Q99519 415 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 NACAE9PAV3 2078 aa5.62□□□□□ -1.51
HLA-DPA1-241ENST00000417724 DNAH2Q9P225 4427 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TRAV30A0A087WSZ9 112 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TEX48A0A1B0GUV7 120 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 INS-IGF2F8WCM5 200 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 CLN5O75503 358 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 PMP2P02689 132 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 EMP1P54849 157 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 MXD1Q05195 221 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 PHLDA2Q53GA4 152 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 OR4X1Q8NH49 305 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 S100A16Q96FQ6 103 aaKnown RBP5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 RNF167Q9H6Y7 350 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SEPSECSQ9HD40 501 aaKnown RBP5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 PKD1P98161 4303 aa5.61□□□□□ -1.51
HLA-DPA1-241ENST00000417724 ABCA13Q86UQ4 5058 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 ZNF705FA8MVS1 300 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 H3BMM0 161 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TMEM127O75204 238 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 CLEC2LP0C7M8 214 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 ZNF705DP0CH99 300 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 ZNF705BP0CI00 300 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 PSMB9P28065 219 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 OPRK1P41145 380 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 RPL5P46777 297 aaKnown RBP5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 HOXA1P49639 335 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 FAM3BP58499 235 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TSPAN5P62079 268 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 OXA1LQ15070 435 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SPINK9Q5DT21 86 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 ZNF705AQ6ZN79 300 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TBC1D26Q86UD7 250 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 Q8N1X5 172 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 SLC35G3Q8N808 338 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 Q8WTZ3 238 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 NRG4Q8WWG1 115 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 MRGPRFQ96AM1 343 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 CNBD2Q96M20 576 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 NIPSNAP3BQ9BS92 247 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 PDCD10Q9BUL8 212 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 DKK2Q9UBU2 259 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TMED3Q9Y3Q3 217 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 RFNGQ9Y644 331 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 U3KQE9 123 aa5.6□□□□□ -1.51
HLA-DPA1-241ENST00000417724 IGHV3OR16-12A0A075B7B8 117 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 FAM90A26D6RGX4 464 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 IGKV1-39P01597 117 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 IGKV1-17P01599 117 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 IGKV1D-39P04432 117 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 HNRNPCP07910 306 aaKnown RBP eCLIP5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 RNASE2P10153 161 aaKnown RBP5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 HTN3P15516 51 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 NAT1P18440 290 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 ETV6P41212 452 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TNP2Q05952 138 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 MLANAQ16655 118 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 TIGITQ495A1 244 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 FAM222AQ5U5X8 452 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 C16orf54Q6UWD8 224 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 LYSMD2Q8IV50 215 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 GLMPQ8WWB7 406 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 FCGR1BQ92637 280 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 FXYD6Q9H0Q3 95 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 FNDC4Q9H6D8 234 aaPredicted RBP5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 ENY2Q9NPA8 101 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 NRN1Q9NPD7 142 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 ANAPC10Q9UM13 185 aa5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 DYNC1H1Q14204 4646 aaKnown RBP5.59□□□□□ -1.51
HLA-DPA1-241ENST00000417724 A0A0B4J293 547 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RPS10-NUDT3A0A1W2PQS6 291 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ATG12O94817 140 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 HLA-DRB4P13762 266 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 HLA-DMAP28067 261 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 PRSS3P35030 304 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 HRH1P35367 487 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 NKX2-1P43699 371 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms