RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SNCAP37840 140 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 KLF5Q13887 457 aaPredicted RBP13.56□□□□□ -0.24
VCP-202ENST00000417448 RPEL1Q2QD12 228 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 AARDQ4LEZ3 155 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 UBAC2Q8NBM4 344 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 UXS1Q8NBZ7 420 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 ZNF502Q8TBZ5 544 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 ENKURQ8TC29 256 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 MAGT1Q9H0U3 335 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 HIPK2Q9H2X6 1198 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 SELENOKQ9Y6D0 94 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 A0A1B0GU03 582 aa13.55□□□□□ -0.24
VCP-202ENST00000417448 OR2T8A6NH00 312 aa13.55□□□□□ -0.24
VCP-202ENST00000417448 CCSO14618 274 aa13.55□□□□□ -0.24
VCP-202ENST00000417448 MT-CO2P00403 227 aa13.55□□□□□ -0.24
VCP-202ENST00000417448 TNFRSF9Q07011 255 aa13.55□□□□□ -0.24
VCP-202ENST00000417448 OR52E5Q8NH55 327 aa13.55□□□□□ -0.24
VCP-202ENST00000417448 COQ8AQ8NI60 647 aa13.55□□□□□ -0.24
VCP-202ENST00000417448 THYN1Q9P016 225 aa13.55□□□□□ -0.24
VCP-202ENST00000417448 DUXBA0A1W2PPF3 345 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 F8W735 103 aaPredicted RBP13.54□□□□□ -0.24
VCP-202ENST00000417448 I3L2K1 104 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 PITX3O75364 302 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 IAPPP10997 89 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 ZP3P21754 424 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 ZNF114Q8NC26 417 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 TMEM170AQ8WVE7 144 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 CXorf58Q96LI9 332 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 CHRDL1Q9BU40 450 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 HSPB7Q9UBY9 170 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 TMED3Q9Y3Q3 217 aa13.54□□□□□ -0.24
VCP-202ENST00000417448 TRBV7-1A0A0A6YYK4 115 aa13.53□□□□□ -0.24
VCP-202ENST00000417448 CYB5BO43169 146 aa13.53□□□□□ -0.24
VCP-202ENST00000417448 Q56UQ5 140 aa13.53□□□□□ -0.24
VCP-202ENST00000417448 RPP25LQ8N5L8 163 aaKnown RBP13.53□□□□□ -0.24
VCP-202ENST00000417448 VN1R17PQ8TDU5 208 aa13.53□□□□□ -0.24
VCP-202ENST00000417448 MITD1Q8WV92 249 aa13.53□□□□□ -0.24
VCP-202ENST00000417448 OR10C1Q96KK4 312 aa13.53□□□□□ -0.24
VCP-202ENST00000417448 C21orf62Q9NYP8 219 aa13.53□□□□□ -0.24
VCP-202ENST00000417448 MRPL36Q9P0J6 103 aaKnown RBP13.53□□□□□ -0.24
VCP-202ENST00000417448 IGHV3OR16-8A0A075B7F1 116 aa13.52□□□□□ -0.25
VCP-202ENST00000417448 INS-IGF2F8WCM5 200 aa13.52□□□□□ -0.25
VCP-202ENST00000417448 GGCTO75223 188 aaKnown RBP13.52□□□□□ -0.25
VCP-202ENST00000417448 IL34Q6ZMJ4 242 aa13.52□□□□□ -0.25
VCP-202ENST00000417448 DTD1Q8TEA8 209 aa13.52□□□□□ -0.25
VCP-202ENST00000417448 ZNF431Q8TF32 576 aaPredicted RBP13.52□□□□□ -0.25
VCP-202ENST00000417448 FNDC4Q9H6D8 234 aaPredicted RBP13.52□□□□□ -0.25
VCP-202ENST00000417448 ZNF320A2RRD8 509 aa13.51□□□□□ -0.25
VCP-202ENST00000417448 BSXQ3C1V8 233 aa13.51□□□□□ -0.25
VCP-202ENST00000417448 PLET1Q6UQ28 207 aa13.51□□□□□ -0.25
VCP-202ENST00000417448 OR9G4Q8NGQ1 327 aa13.51□□□□□ -0.25
VCP-202ENST00000417448 OR1L6Q8NGR2 347 aa13.51□□□□□ -0.25
VCP-202ENST00000417448 FAM25EA8MYX2 175 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 WRBO00258 174 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 TGOLN2O43493 480 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 IFNA10P01566 189 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 IFNA21P01568 189 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 CSN3P07498 182 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 ADMP35318 185 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 SUB1P53999 127 aaKnown RBP eCLIP13.5□□□□□ -0.25
VCP-202ENST00000417448 DEFA1P59665 94 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 DEFA3P59666 94 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 PVRIGQ6DKI7 326 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 UNQ9165/PRO28630Q6UXU0 137 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 LINC00322Q6ZN03 302 aaPredicted RBP13.5□□□□□ -0.25
VCP-202ENST00000417448 C12orf45Q8N5I9 185 aaPredicted RBP13.5□□□□□ -0.25
VCP-202ENST00000417448 DUSP18Q8NEJ0 188 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 SLC24A4Q8NFF2 622 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 CACNG8Q8WXS5 425 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 TUBA4BQ9H853 241 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 GSKIPQ9P0R6 139 aa13.5□□□□□ -0.25
VCP-202ENST00000417448 INMT-MINDY4F8WBC2 141 aa13.49□□□□□ -0.25
VCP-202ENST00000417448 SCGB1D2O95969 90 aa13.49□□□□□ -0.25
VCP-202ENST00000417448 SLC25A6P12236 298 aa13.49□□□□□ -0.25
VCP-202ENST00000417448 NPY1RP25929 384 aa13.49□□□□□ -0.25
VCP-202ENST00000417448 HTR2BP41595 481 aa13.49□□□□□ -0.25
VCP-202ENST00000417448 MFAP4P55083 255 aa13.49□□□□□ -0.25
VCP-202ENST00000417448 IAH1Q2TAA2 248 aaPredicted RBP13.49□□□□□ -0.25
VCP-202ENST00000417448 GATAD1Q8WUU5 269 aa13.49□□□□□ -0.25
VCP-202ENST00000417448 ZNF414Q96IQ9 312 aa13.49□□□□□ -0.25
VCP-202ENST00000417448 ELOVL1Q9BW60 279 aa13.49□□□□□ -0.25
VCP-202ENST00000417448 PAIP2BQ9ULR5 123 aaKnown RBP13.49□□□□□ -0.25
VCP-202ENST00000417448 ZNF207O43670 478 aaKnown RBP13.48□□□□□ -0.25
VCP-202ENST00000417448 CTSGP08311 255 aa13.48□□□□□ -0.25
VCP-202ENST00000417448 OPRK1P41145 380 aa13.48□□□□□ -0.25
VCP-202ENST00000417448 POLR2GP62487 172 aaKnown RBP eCLIP13.48□□□□□ -0.25
VCP-202ENST00000417448 TATDN3Q17R31 274 aa13.48□□□□□ -0.25
VCP-202ENST00000417448 TM4SF20Q53R12 229 aa13.48□□□□□ -0.25
VCP-202ENST00000417448 C2orf83Q53S99 150 aa13.48□□□□□ -0.25
VCP-202ENST00000417448 ZBTB8BQ8NAP8 495 aaPredicted RBP13.48□□□□□ -0.25
VCP-202ENST00000417448 OR4D5Q8NGN0 318 aa13.48□□□□□ -0.25
VCP-202ENST00000417448 H3BP45 60 aa13.47□□□□□ -0.25
VCP-202ENST00000417448 SYNGR2O43760 224 aa13.47□□□□□ -0.25
VCP-202ENST00000417448 IL5P05113 134 aa13.47□□□□□ -0.25
VCP-202ENST00000417448 FAM209BQ5JX69 171 aa13.47□□□□□ -0.25
VCP-202ENST00000417448 GPHB5Q86YW7 130 aa13.47□□□□□ -0.25
VCP-202ENST00000417448 VPS13DQ5THJ4 4388 aa13.47□□□□□ -0.25
VCP-202ENST00000417448 PIGBOS1A0A0B4J2F0 54 aa13.46□□□□□ -0.25
VCP-202ENST00000417448 IZUMO1RA6ND01 250 aa13.46□□□□□ -0.25
VCP-202ENST00000417448 C5orf51A6NDU8 294 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms