RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 CACNG8Q8WXS5 425 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 LINC00476Q8WZB0 136 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 WDR89Q96FK6 387 aaPredicted RBP9.7□□□□□ -0.86
LINC00339-202ENST00000416769 FYTTD1Q96QD9 318 aaKnown RBP9.7□□□□□ -0.86
LINC00339-202ENST00000416769 NMES1Q9C002 83 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 SRD5A3Q9H8P0 318 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 GSKIPQ9P0R6 139 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 MGAT4CQ9UBM8 478 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 HSPB7Q9UBY9 170 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 KMT2AQ03164 3969 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 A0A0G2JLM5 398 aa9.69□□□□□ -0.86
LINC00339-202ENST00000416769 A0A1B0GW64 132 aa9.69□□□□□ -0.86
LINC00339-202ENST00000416769 TEX22C9J3V5 150 aa9.69□□□□□ -0.86
LINC00339-202ENST00000416769 PPP5D1E7EU14 171 aa9.69□□□□□ -0.86
LINC00339-202ENST00000416769 SIX6O95475 246 aa9.69□□□□□ -0.86
LINC00339-202ENST00000416769 NKX2-1P43699 371 aaPredicted RBP9.69□□□□□ -0.86
LINC00339-202ENST00000416769 TNFRSF9Q07011 255 aa9.69□□□□□ -0.86
LINC00339-202ENST00000416769 DNAH10Q8IVF4 4471 aa9.69□□□□□ -0.86
LINC00339-202ENST00000416769 TTC9CQ8N5M4 171 aa9.69□□□□□ -0.86
LINC00339-202ENST00000416769 SYNGR2O43760 224 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 CRYGCP07315 174 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 CXCL3P19876 107 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 H2BFSP57053 126 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 ERHP84090 104 aaKnown RBP9.68□□□□□ -0.86
LINC00339-202ENST00000416769 RHOGP84095 191 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 PMS2P11Q13670 270 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 EXOSC2Q13868 293 aaKnown RBP9.68□□□□□ -0.86
LINC00339-202ENST00000416769 OR11H7Q8NGC8 314 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 ASB13Q8WXK3 278 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 HINT2Q9BX68 163 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 RBKSQ9H477 322 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 ENY2Q9NPA8 101 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 SIGLEC8Q9NYZ4 499 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 S4R3C0 116 aa9.68□□□□□ -0.86
LINC00339-202ENST00000416769 IGLC7A0M8Q6 106 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 NPIPB5A8MRT5 1133 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 CEBPZOSA8MTT3 80 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 LY6G6CO95867 125 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 IGHV3-23P01764 117 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 PSMB6P28072 239 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 WT1-ASQ06250 92 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 GUCA2BQ16661 112 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 DEFB114Q30KQ6 69 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 OR2C3Q8N628 320 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 OR10W1Q8NGF6 305 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 CHAC2Q8WUX2 184 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 ZNF436Q9C0F3 470 aaPredicted RBP9.67□□□□□ -0.86
LINC00339-202ENST00000416769 DMRT1Q9Y5R6 373 aa9.67□□□□□ -0.86
LINC00339-202ENST00000416769 OR11H12B2RN74 326 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 WRBO00258 174 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 NXPH3O95157 252 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 MBPP02686 304 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-202ENST00000416769 OR13C7P0DN81 318 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 CTRB1P17538 263 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 HOXA1P49639 335 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-202ENST00000416769 POLR2GP62487 172 aaKnown RBP eCLIP9.66□□□□□ -0.86
LINC00339-202ENST00000416769 KLK9Q2XQG4 91 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 SPINK9Q5DT21 86 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 CTRB2Q6GPI1 263 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 RPP25LQ8N5L8 163 aaKnown RBP9.66□□□□□ -0.86
LINC00339-202ENST00000416769 DTD1Q8TEA8 209 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 DYNLRB2Q8TF09 96 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 CIB3Q96Q77 187 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-202ENST00000416769 HEYLQ9NQ87 328 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-202ENST00000416769 KLK9Q9UKQ9 250 aa9.66□□□□□ -0.86
LINC00339-202ENST00000416769 C2orf70A6NJV1 201 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 K7EPK0 472 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 OR2J3O76001 311 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 OR2C1O95371 312 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 SCGB1D2O95969 90 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 RLN2P04090 185 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 GIPP09681 153 aaPredicted RBP9.65□□□□□ -0.86
LINC00339-202ENST00000416769 FOLR2P14207 255 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 AREGP15514 252 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 SUB1P53999 127 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC00339-202ENST00000416769 ATP5IP56385 69 aaPredicted RBP9.65□□□□□ -0.86
LINC00339-202ENST00000416769 TAS2R30P59541 319 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 RAB32Q13637 225 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 OR1L6Q8NGR2 347 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 USMG5Q96IX5 58 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 SMIM8Q96KF7 97 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 RAB40CQ96S21 281 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 OVOL2Q9BRP0 275 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 MAGT1Q9H0U3 335 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 U3KQ87 197 aa9.65□□□□□ -0.86
LINC00339-202ENST00000416769 PCLOQ9Y6V0 5065 aa9.65□□□□□ -0.87
LINC00339-202ENST00000416769 KIAA1109Q2LD37 5005 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.64□□□□□ -0.87
LINC00339-202ENST00000416769 TRBV9A0A0B4J1U6 114 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 A0A1B0GVG6 124 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 SNCAP37840 140 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 HTR2BP41595 481 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 BCAP31P51572 246 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 RAP2BP61225 183 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 RPP30P78346 268 aaKnown RBP9.64□□□□□ -0.87
LINC00339-202ENST00000416769 BSXQ3C1V8 233 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 NOXA1Q86UR1 476 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 TMEM61Q8N0U2 210 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 ZNF114Q8NC26 417 aa9.64□□□□□ -0.87
LINC00339-202ENST00000416769 IL17DQ8TAD2 202 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms