RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 MBD3L2Q8NHZ7 208 aaPredicted RBP15.45■□□□□ 0.06
SHANK3-202ENST00000414786 ZNF837Q96EG3 531 aaPredicted RBP15.45■□□□□ 0.06
SHANK3-202ENST00000414786 DOCK1Q14185 1865 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 PRSS23O95084 383 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 TMEM105Q8N8V8 129 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 NEUROG1Q92886 237 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 PEF1Q9UBV8 284 aaKnown RBP15.44■□□□□ 0.06
SHANK3-202ENST00000414786 POLEQ07864 2286 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 KBTBD11-OT1A0A1B0GTJ5 212 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 TJP1Q07157 1748 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 PGPEP1LA6NFU8 196 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 VWC2LB2RUY7 222 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 PSG7Q13046 419 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 MS4A6AQ9H2W1 248 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 CLDN16Q9Y5I7 305 aa15.44■□□□□ 0.06
SHANK3-202ENST00000414786 MBNL3Q9NUK0 354 aaKnown RBP15.44■□□□□ 0.06
SHANK3-202ENST00000414786 DUSP14O95147 198 aaKnown RBP15.43■□□□□ 0.06
SHANK3-202ENST00000414786 SSBP2P81877 361 aaPredicted RBP15.43■□□□□ 0.06
SHANK3-202ENST00000414786 TMEM187Q14656 261 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 GDF15Q99988 308 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 KNCNA6PVL3 124 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 FAM209AQ5JX71 171 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 DEPPQ9NTK1 212 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 FABP5P3A8MUU1 101 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 EREGO14944 169 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 DDTP30046 118 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 COX11Q9Y6N1 276 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 A0A087WWL8 130 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 PIP4P2Q8N4L2 257 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 HIST1H2BAQ96A08 127 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 MPDZO75970 2070 aa15.43■□□□□ 0.06
SHANK3-202ENST00000414786 VAX1Q5SQQ9 334 aa15.42■□□□□ 0.06
SHANK3-202ENST00000414786 G6PC2Q9NQR9 355 aa15.42■□□□□ 0.06
SHANK3-202ENST00000414786 C4orf51C9J302 202 aa15.42■□□□□ 0.06
SHANK3-202ENST00000414786 ITGB1BP1O14713 200 aa15.42■□□□□ 0.06
SHANK3-202ENST00000414786 Q96M66 194 aa15.42■□□□□ 0.06
SHANK3-202ENST00000414786 ALPK2Q86TB3 2170 aa15.42■□□□□ 0.06
SHANK3-202ENST00000414786 CEP250Q9BV73 2442 aa15.42■□□□□ 0.06
SHANK3-202ENST00000414786 TRGV11A0A075B6L2 103 aa15.42■□□□□ 0.06
SHANK3-202ENST00000414786 C2orf68Q2NKX9 166 aa15.42■□□□□ 0.06
SHANK3-202ENST00000414786 SP7Q8TDD2 431 aaPredicted RBP15.42■□□□□ 0.06
SHANK3-202ENST00000414786 ANAPC13Q9BS18 74 aa15.42■□□□□ 0.06
SHANK3-202ENST00000414786 TRAV41A0A0B4J266 112 aa15.41■□□□□ 0.06
SHANK3-202ENST00000414786 TRAV5A0A0B4J249 113 aa15.41■□□□□ 0.06
SHANK3-202ENST00000414786 RAMP3O60896 148 aa15.41■□□□□ 0.06
SHANK3-202ENST00000414786 IGLV1-36A0A0B4J1U3 117 aa15.41■□□□□ 0.06
SHANK3-202ENST00000414786 OCIAD2Q56VL3 154 aa15.41■□□□□ 0.06
SHANK3-202ENST00000414786 KLF17Q5JT82 389 aaPredicted RBP15.41■□□□□ 0.06
SHANK3-202ENST00000414786 PUSL1Q8N0Z8 303 aaKnown RBP15.41■□□□□ 0.06
SHANK3-202ENST00000414786 SMIM8Q96KF7 97 aa15.41■□□□□ 0.06
SHANK3-202ENST00000414786 IGLV2-23P01705 113 aa15.41■□□□□ 0.06
SHANK3-202ENST00000414786 SRSF1Q07955 248 aaKnown RBP eCLIP15.41■□□□□ 0.06
SHANK3-202ENST00000414786 RNF125Q96EQ8 232 aa15.41■□□□□ 0.06
SHANK3-202ENST00000414786 PAPPAQ13219 1627 aa15.41■□□□□ 0.06
SHANK3-202ENST00000414786 GCM2O75603 506 aaPredicted RBP15.4■□□□□ 0.06
SHANK3-202ENST00000414786 GAGE2EQ4V326 116 aa15.4■□□□□ 0.06
SHANK3-202ENST00000414786 GAGE2DQ9UEU5 116 aa15.4■□□□□ 0.06
SHANK3-202ENST00000414786 DEFB105AQ8NG35 78 aa15.4■□□□□ 0.06
SHANK3-202ENST00000414786 GPX4P36969 197 aaPredicted RBP15.4■□□□□ 0.06
SHANK3-202ENST00000414786 ERCC8Q13216 396 aa15.4■□□□□ 0.06
SHANK3-202ENST00000414786 RUSC1-AS1Q66K80 236 aa15.4■□□□□ 0.06
SHANK3-202ENST00000414786 TRAV8-3A0A0A6YYJ7 113 aa15.4■□□□□ 0.06
SHANK3-202ENST00000414786 PLNP26678 52 aa15.4■□□□□ 0.06
SHANK3-202ENST00000414786 GATAD1Q8WUU5 269 aa15.4■□□□□ 0.06
SHANK3-202ENST00000414786 THAP8Q8NA92 274 aa15.4■□□□□ 0.06
SHANK3-202ENST00000414786 MSRB2Q9Y3D2 182 aa15.4■□□□□ 0.06
SHANK3-202ENST00000414786 SRRM4A7MD48 611 aaKnown RBP15.39■□□□□ 0.05
SHANK3-202ENST00000414786 ZNF561-AS1K7EIQ3 104 aa15.39■□□□□ 0.05
SHANK3-202ENST00000414786 CFHR1Q03591 330 aa15.39■□□□□ 0.05
SHANK3-202ENST00000414786 HLA-DQB1P01920 261 aa15.39■□□□□ 0.05
SHANK3-202ENST00000414786 IL36BQ9NZH7 164 aa15.39■□□□□ 0.05
SHANK3-202ENST00000414786 C15orf32Q32M92 178 aa15.39■□□□□ 0.05
SHANK3-202ENST00000414786 GHRHP01286 108 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 MPTX1A8MV57 137 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 KIF26BQ2KJY2 2108 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 EXOC3-AS1Q8N2X6 119 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 Q96MF0 132 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 XCL2Q9UBD3 114 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 ABCA3Q99758 1704 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 IGKV1D-43A0A0B4J1Z2 117 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 FOXF2Q12947 444 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 PILRAQ9UKJ1 303 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 SNHG12Q9BXW3 62 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 ABCA4P78363 2273 aa15.38■□□□□ 0.05
SHANK3-202ENST00000414786 TCRAP04437 139 aa15.37■□□□□ 0.05
SHANK3-202ENST00000414786 PFN2P35080 140 aa15.37■□□□□ 0.05
SHANK3-202ENST00000414786 RPUSD1Q9UJJ7 312 aaKnown RBP15.37■□□□□ 0.05
SHANK3-202ENST00000414786 ARFGEF3Q5TH69 2177 aa15.37■□□□□ 0.05
SHANK3-202ENST00000414786 DOCK11Q5JSL3 2073 aa15.37■□□□□ 0.05
SHANK3-202ENST00000414786 OSR1Q8TAX0 266 aaPredicted RBP15.37■□□□□ 0.05
SHANK3-202ENST00000414786 WDYHV1Q96HA8 205 aa15.37■□□□□ 0.05
SHANK3-202ENST00000414786 RBM38Q9H0Z9 239 aaKnown RBP15.37■□□□□ 0.05
SHANK3-202ENST00000414786 TMEM133Q9H2Q1 129 aa15.37■□□□□ 0.05
SHANK3-202ENST00000414786 ZDBF2Q9HCK1 2354 aa15.37■□□□□ 0.05
SHANK3-202ENST00000414786 ZNF345Q14585 488 aa15.37■□□□□ 0.05
SHANK3-202ENST00000414786 C10orf55Q5SWW7 151 aa15.37■□□□□ 0.05
SHANK3-202ENST00000414786 PLCH1Q4KWH8 1693 aa15.37■□□□□ 0.05
SHANK3-202ENST00000414786 SYNJ2BPP57105 145 aa15.36■□□□□ 0.05
SHANK3-202ENST00000414786 NIT1Q86X76 327 aa15.36■□□□□ 0.05
SHANK3-202ENST00000414786 LOC102723996A0A087X1L8 192 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms