RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CLN8Q9UBY8 286 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 RABL2BQ9UNT1 228 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 POLR1DQ9Y2S0 133 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 FAM215AQ9Y5M1 114 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 FRYLO94915 3013 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 YLPM1P49750 1951 aaKnown RBP1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 DMXL1Q9Y485 3027 aa1.88□□□□□ -2.11
HMGB1P11-201ENST00000413899 KNTC1P50748 2209 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF292O60281 2723 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 TRGV5A0A0B4J1U4 118 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 IGKV1-6A0A0C4DH72 117 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR5H14A6NHG9 310 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 SNRPGP15A8MWD9 76 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 F5H5K5 113 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 SYNGR1O43759 233 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 CRTAPO75718 401 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 TRAPPC6AO75865 159 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 SIX6O95475 246 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 CD8AP01732 235 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 UBBP0CG47 229 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 COX5BP10606 129 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 CCL2P13500 99 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF35P13682 527 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 GTF2F2P13984 249 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 CTRB1P17538 263 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 USF1P22415 310 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 HTR1DP28221 377 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ERP29P30040 261 aaKnown RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 PRSS3P35030 304 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 PFN2P35080 140 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF93P35789 620 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 RBM11P57052 281 aaKnown RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 CARD18P57730 90 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ACTBP60709 375 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ACTG1P63261 375 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 IL15RAQ13261 267 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 DHRS2Q13268 280 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 TSC22D1Q15714 1073 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 KISS1Q15726 138 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 PIGYQ3MUY2 71 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 LGALSLQ3ZCW2 172 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 HIKESHIQ53FT3 197 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 SPRNQ5BIV9 151 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 C12orf54Q6X4T0 127 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 SSX9Q7RTT3 188 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 C6orf201Q7Z4U5 140 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ANGPTL5Q86XS5 388 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC7A5P1Q8MH63 180 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ASCC1Q8N9N2 400 aaKnown RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 WDR31Q8NA23 367 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 PXT1Q8NFP0 134 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF431Q8TF32 576 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 TNFAIP8L1Q8WVP5 186 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 PP6455Q8WZ26 134 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 MAFIPQ8WZ33 124 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 TTC28Q96AY4 2481 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 APH1AQ96BI3 265 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 S100A16Q96FQ6 103 aaKnown RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 IP6K3Q96PC2 410 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 GINS4Q9BRT9 223 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF436Q9C0F3 470 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ALX4Q9H161 411 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 RGCCQ9H4X1 137 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 C11orf1Q9H5F2 150 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 STMN3Q9NZ72 180 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 PTTG3PQ9NZH4 202 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF230Q9UIE0 474 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 AK3Q9UIJ7 227 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 SCP2D1Q9UJQ7 156 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 RAB22AQ9UL26 194 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 NOSIPQ9Y314 301 aaKnown RBP1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 DYSFO75923 2080 aa1.87□□□□□ -2.11
HMGB1P11-201ENST00000413899 CACNA1DQ01668 2161 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 ARFGEF3Q5TH69 2177 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 A0A0C4DFX4 3053 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 SMIM26A0A096LP01 95 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 TRBV6-7A0A0A0MS04 114 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 IGHV3-49A0A0A0MS15 119 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 IGHV1-3A0A0C4DH29 117 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 C9orf170A2RU37 121 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 SLC22A20A6NK97 555 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 ZNF736B4DX44 427 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 MCRIP1C9JLW8 97 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 NDUFC2-KCTD14E9PQ53 114 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 GEMIN2O14893 280 aaKnown RBP1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 XRCC2O43543 280 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 PDCD6O75340 191 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 MRPL33O75394 65 aaKnown RBP1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 FCN3O75636 299 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 NAPSAO96009 420 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 DHFRP00374 187 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 CYB5R3P00387 301 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 CST4P01036 141 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 PMP2P02689 132 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 TFF1P04155 84 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 CSN2P05814 226 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 ERCC1P07992 297 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 NMBP08949 121 aa1.86□□□□□ -2.11
HMGB1P11-201ENST00000413899 OR4E1P0C645 316 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms