RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 MRPL36Q9P0J6 103 aaKnown RBP5.22□□□□□ -1.57
VPS41-204ENST00000413141 ZNF580Q9UK33 172 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 KLK9Q9UKQ9 250 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 TLN2Q9Y4G6 2542 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 IGKV1D-37A0A075B6S9 117 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 IGHV3-21A0A0B4J1V1 117 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 DNAJC9-AS1A6NH13 148 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 TRIM77I1YAP6 450 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 AP4M1O00189 453 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 AGPAT2O15120 278 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 CYB5BO43169 146 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 SOX15O60248 233 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 IGHV3-48P01763 117 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 CD99P14209 185 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 FOSL1P15407 271 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 HIST1H1BP16401 226 aaKnown RBP5.21□□□□□ -1.58
VPS41-204ENST00000413141 CAMLGP49069 296 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 RAB5CP51148 216 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 SERF2P84101 59 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 DEFA5Q01523 94 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 C4orf48Q5BLP8 95 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 AKR1C8PQ5T2L2 129 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 DPPA3Q6W0C5 159 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 Q6ZRG5 221 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 Q6ZS46 218 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 STPG3Q8N7X2 389 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 ZNF709Q8N972 641 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 THAP8Q8NA92 274 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 TMEM116Q8NCL8 245 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 OR5T1Q8NG75 326 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 FAM213BQ8TBF2 198 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 NPIPB3Q92617 1050 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 SAT2Q96F10 170 aaPredicted RBP5.21□□□□□ -1.58
VPS41-204ENST00000413141 NPFFR1Q9GZQ6 430 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 VSIRQ9H7M9 311 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 THYN1Q9P016 225 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 CDC42EP3Q9UKI2 254 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 PXMP4Q9Y6I8 212 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 BAHCC1Q9P281 2608 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 ACANP16112 2415 aa5.21□□□□□ -1.58
VPS41-204ENST00000413141 MXRA5Q9NR99 2828 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 TRBV9A0A0B4J1U6 114 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 TCRBV4S1A1TA0A5B7 111 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 LINC00862A6NCI5 91 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 MFSD2BA6NFX1 497 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 H3BUA1 57 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 OR2J3O76001 311 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 YIF1AO95070 293 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 NDUFB8O95169 186 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 TSPAN15O95858 294 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 SRD5A1P18405 259 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 PPIFP30405 207 aaKnown RBP5.2□□□□□ -1.58
VPS41-204ENST00000413141 OR10J1P30954 320 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 RPL29P47914 159 aaKnown RBP5.2□□□□□ -1.58
VPS41-204ENST00000413141 FHITP49789 147 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 RAB2AP61019 212 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 B2MP61769 119 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 RHOGP84095 191 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 PRR20EP86478 221 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 PRR20CP86479 221 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 PRR20DP86480 221 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 PRR20BP86481 221 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 PRR20AP86496 221 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 CFHR3Q02985 330 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 ZNF616Q08AN1 781 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 RAB31Q13636 194 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 NDUFA5Q16718 116 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 TMEM95Q3KNT9 176 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 TMEM41BQ5BJD5 291 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 FFAR4Q5NUL3 377 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 PXDC1Q5TGL8 231 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 MIC13Q5XKP0 118 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 RBMS3Q6XE24 437 aaKnown RBP5.2□□□□□ -1.58
VPS41-204ENST00000413141 OR4X1Q8NH49 305 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 NOL4LQ96MY1 436 aaPredicted RBP5.2□□□□□ -1.58
VPS41-204ENST00000413141 DUX5Q96PT3 197 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 ZNF702PQ9H963 129 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 ESM1Q9NQ30 184 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 SLC39A9Q9NUM3 307 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 LINC00527Q9UJ94 153 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 FBXL7Q9UJT9 491 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 SLC45A2Q9UMX9 530 aa5.2□□□□□ -1.58
VPS41-204ENST00000413141 SONP18583 2426 aaKnown RBP5.19□□□□□ -1.58
VPS41-204ENST00000413141 FLNBO75369 2602 aaKnown RBP5.19□□□□□ -1.58
VPS41-204ENST00000413141 FAM223BA6NKX1 122 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 ZFP92A6NM28 416 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 F8W735 103 aaPredicted RBP5.19□□□□□ -1.58
VPS41-204ENST00000413141 CLDN34H7C241 214 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 CLN5O75503 358 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 BRI3O95415 125 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 MBP02144 154 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 LINC00869P0C866 280 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 IGLC1P0CG04 106 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 M6PRP20645 277 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 BLOC1S1P78537 153 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 ZNF90Q03938 601 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 ZNF726P1Q15940 193 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 C15orf32Q32M92 178 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 ACOT6Q3I5F7 207 aaPredicted RBP5.19□□□□□ -1.58
VPS41-204ENST00000413141 GCSAMLQ5JQS6 135 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms