RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 PROCRQ9UNN8 238 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 ZNF407Q9C0G0 2248 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 OR2J3O76001 311 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 TIMM23BQ5SRD1 257 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 CRIP3Q6Q6R5 217 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 GGNQ86UU5 652 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 Q8NFD4 153 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 CEP290O15078 2479 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 K7ESF4 209 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 SLC25A17O43808 307 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 BMI1P35226 326 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 MCRIP2Q9BUT9 160 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 MBNL3Q9NUK0 354 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 TRBV20OR9-2A0A075B6H5 130 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 MRPL14Q6P1L8 145 aaKnown RBP11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 SPACA3Q8IXA5 215 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 OR9G1Q8NH87 305 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 SH2D7A6NKC9 451 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 PPBPP02775 128 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 COLCA1Q6ZS62 124 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 BHLHA15Q7RTS1 189 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 DTX1Q86Y01 620 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 CACNG8Q8WXS5 425 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 IGHV3-21A0A0B4J1V1 117 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 LPAL2Q16609 132 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 MORN2Q502X0 79 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 GOLT1AQ6ZVE7 132 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 OR9G4Q8NGQ1 327 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 OR1N2Q8NGR9 330 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 CT55Q8WUE5 264 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 FMC1Q96HJ9 113 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 EPDR1Q9UM22 224 aa11.49□□□□□ -0.57
CLTCL1-201ENST00000412649 TRAV5A0A0B4J249 113 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 TRGV8A0A0C4DH27 118 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 MNX1P50219 401 aaPredicted RBP11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 FOXG1P55316 489 aaPredicted RBP11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 SAMD5Q5TGI4 173 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 ZADH2Q8N4Q0 377 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 DEFB125Q8N687 156 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 TMUB1Q9BVT8 246 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 TRAV3A0A0B4J244 114 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 TFF1P04155 84 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 GUSBP1Q15486 140 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 VWC2Q2TAL6 325 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 TDHQ8IZJ6 230 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 TMEM189A5PLL7 270 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 NDUFB8O95169 186 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 REG1BP48304 166 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 PSG7Q13046 419 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 KIR3DS1Q14943 382 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 SIT1Q9Y3P8 196 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 PCNX3Q9H6A9 2034 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 HIST1H4GQ99525 98 aa11.48□□□□□ -0.57
CLTCL1-201ENST00000412649 FAM222BQ8WU58 562 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 RASL11BQ9BPW5 248 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 LOC102723996A0A087X1L8 192 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 CLEC2AQ6UVW9 174 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 APELAP0DMC3 54 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 MYOZ3Q8TDC0 251 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 LINC00479Q96M42 142 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 PRELID3AQ96N28 172 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 SLC25A33Q9BSK2 321 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 DYNLRB1Q9NP97 96 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 NCBP2LA6PVI3 153 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 MOSP00540 346 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 TNFAIP6P98066 277 aaPredicted RBP11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 TWIST1Q15672 202 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 SCGB1D4Q6XE38 83 aa11.47□□□□□ -0.57
CLTCL1-201ENST00000412649 CACNG7P62955 275 aa11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 EBLN2Q6P2I7 272 aa11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 ZNF295-AS1Q8N0V1 137 aa11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 ZNRF1Q8ND25 227 aa11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 RP1L1Q8IWN7 2480 aaPredicted RBP11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 ZNF138P52744 262 aa11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 CD69Q07108 199 aa11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 HCP5Q6MZN7 132 aa11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 SARAFQ96BY9 339 aa11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 EML5Q05BV3 1969 aa11.46□□□□□ -0.57
CLTCL1-201ENST00000412649 KIR2DL2P43627 348 aaPredicted RBP11.46□□□□□ -0.58
CLTCL1-201ENST00000412649 RNF7Q9UBF6 113 aa11.46□□□□□ -0.58
CLTCL1-201ENST00000412649 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 MOB3BQ86TA1 216 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 WFDC8Q8IUA0 241 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 C18orf15Q96N68 181 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 MAP1LC3AQ9H492 121 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 IQCF6A8MYZ5 107 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 CELA3AP09093 270 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 FTH1P19P0C7X4 201 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 PRCDQ00LT1 54 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 SCNM1Q9BWG6 230 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 NHP2Q9NX24 153 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 A0A1B0GW15 77 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 C9orf118A6NHY6 69 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 ORM1P02763 201 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 FRMD6-AS1P0C7T7 363 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 PSMG4Q5JS54 123 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms