RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 PRSS46E5RG02 174 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 K7EIM0 57 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 TAAR5O14804 337 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 DFFBO76075 338 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 PRH1P02810 166 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 C4BPBP20851 252 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 SRSF2Q01130 221 aaKnown RBP14.52□□□□□ -0.09
CDC42-204ENST00000411827 OR8G2PQ6IF36 304 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 ZNF491Q8N8L2 437 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 TMEM116Q8NCL8 245 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 OR4X1Q8NH49 305 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 SCARB1Q8WTV0 552 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 MFFQ9GZY8 342 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 KLK15Q9H2R5 256 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 C21orf62Q9NYP8 219 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 TSSC4Q9Y5U2 329 aaPredicted RBP14.52□□□□□ -0.09
CDC42-204ENST00000411827 CST7O76096 145 aa14.51□□□□□ -0.09
CDC42-204ENST00000411827 NDUFB8O95169 186 aa14.51□□□□□ -0.09
CDC42-204ENST00000411827 AP2S1P53680 142 aaPredicted RBP14.51□□□□□ -0.09
CDC42-204ENST00000411827 RUNX1Q01196 453 aa14.51□□□□□ -0.09
CDC42-204ENST00000411827 SLC38A11Q08AI6 406 aa14.51□□□□□ -0.09
CDC42-204ENST00000411827 SPSB3Q6PJ21 355 aa14.51□□□□□ -0.09
CDC42-204ENST00000411827 SLC16A13Q7RTY0 426 aa14.51□□□□□ -0.09
CDC42-204ENST00000411827 LILRB2Q8N423 598 aa14.51□□□□□ -0.09
CDC42-204ENST00000411827 TCRBV4S1A1TA0A5B7 111 aa14.5□□□□□ -0.09
CDC42-204ENST00000411827 ARPC5O15511 151 aa14.5□□□□□ -0.09
CDC42-204ENST00000411827 FABP1P07148 127 aa14.5□□□□□ -0.09
CDC42-204ENST00000411827 KIAA0141Q14154 515 aaPredicted RBP14.5□□□□□ -0.09
CDC42-204ENST00000411827 ZNF343Q6P1L6 599 aa14.5□□□□□ -0.09
CDC42-204ENST00000411827 ZNF502Q8TBZ5 544 aa14.5□□□□□ -0.09
CDC42-204ENST00000411827 TAF15Q92804 592 aaKnown RBP eCLIP14.5□□□□□ -0.09
CDC42-204ENST00000411827 TMEM147Q9BVK8 224 aa14.5□□□□□ -0.09
CDC42-204ENST00000411827 NPVFQ9HCQ7 196 aa14.5□□□□□ -0.09
CDC42-204ENST00000411827 UQCC1Q9NVA1 299 aa14.5□□□□□ -0.09
CDC42-204ENST00000411827 SMLR1H3BR10 107 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 MPDU1O75352 247 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 RPLP1P05386 114 aaKnown RBP14.49□□□□□ -0.09
CDC42-204ENST00000411827 NHLH2Q02577 135 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 RAB31Q13636 194 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 ZNF266Q14584 549 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 VWC2Q2TAL6 325 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 ACSM6Q6P461 480 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 C19orf35Q6ZS72 473 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 TMEM144Q7Z5S9 345 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 TMEM217Q8N7C4 229 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 OR5C1Q8NGR4 320 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 C4orf3Q8WVX3 66 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 BSCL2Q96G97 398 aaPredicted RBP14.49□□□□□ -0.09
CDC42-204ENST00000411827 MDFIQ99750 246 aa14.49□□□□□ -0.09
CDC42-204ENST00000411827 FNDC4Q9H6D8 234 aaPredicted RBP14.49□□□□□ -0.09
CDC42-204ENST00000411827 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.48□□□□□ -0.09
CDC42-204ENST00000411827 RNF222A6NCQ9 220 aa14.48□□□□□ -0.09
CDC42-204ENST00000411827 LGALS1P09382 135 aaKnown RBP14.48□□□□□ -0.09
CDC42-204ENST00000411827 GAMTQ14353 236 aa14.48□□□□□ -0.09
CDC42-204ENST00000411827 TCTEX1D4Q5JR98 221 aa14.48□□□□□ -0.09
CDC42-204ENST00000411827 C10orf99Q6UWK7 81 aa14.48□□□□□ -0.09
CDC42-204ENST00000411827 NDUFA11Q86Y39 141 aa14.48□□□□□ -0.09
CDC42-204ENST00000411827 KCNRGQ8N5I3 272 aa14.48□□□□□ -0.09
CDC42-204ENST00000411827 OR11H4Q8NGC9 324 aa14.48□□□□□ -0.09
CDC42-204ENST00000411827 GNG7O60262 68 aa14.47□□□□□ -0.09
CDC42-204ENST00000411827 CLN5O75503 358 aa14.47□□□□□ -0.09
CDC42-204ENST00000411827 AKR1C1Q04828 323 aa14.47□□□□□ -0.09
CDC42-204ENST00000411827 HAPLN4Q86UW8 402 aa14.47□□□□□ -0.09
CDC42-204ENST00000411827 ATP5SQ99766 215 aa14.47□□□□□ -0.09
CDC42-204ENST00000411827 PARD6GQ9BYG4 376 aaPredicted RBP14.47□□□□□ -0.09
CDC42-204ENST00000411827 NUPL2O15504 423 aaKnown RBP14.46□□□□□ -0.09
CDC42-204ENST00000411827 CFDP00746 253 aaPredicted RBP14.46□□□□□ -0.09
CDC42-204ENST00000411827 IFNA5P01569 189 aa14.46□□□□□ -0.09
CDC42-204ENST00000411827 CD28P10747 220 aa14.46□□□□□ -0.09
CDC42-204ENST00000411827 RND2P52198 227 aa14.46□□□□□ -0.09
CDC42-204ENST00000411827 EIF5AP63241 154 aaKnown RBP14.46□□□□□ -0.09
CDC42-204ENST00000411827 ARL16Q0P5N6 197 aa14.46□□□□□ -0.09
CDC42-204ENST00000411827 Q56UQ5 140 aa14.46□□□□□ -0.09
CDC42-204ENST00000411827 TEPPQ6URK8 271 aa14.46□□□□□ -0.09
CDC42-204ENST00000411827 ZNF747Q9BV97 191 aa14.46□□□□□ -0.09
CDC42-204ENST00000411827 PEF1Q9UBV8 284 aaKnown RBP14.46□□□□□ -0.09
CDC42-204ENST00000411827 BORCS7-ASMTA0A0B4J1R7 106 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 MFSD2BA6NFX1 497 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 JTBO76095 146 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 CLEC3BP05452 202 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 SELENOTP62341 195 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 KHDC1LQ5JSQ8 128 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 C12orf54Q6X4T0 127 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 THAP8Q8NA92 274 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 NPIPB3Q92617 1050 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 ACY3Q96HD9 319 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 CITED1Q99966 193 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 KCNIP2Q9NS61 270 aa14.45□□□□□ -0.1
CDC42-204ENST00000411827 KANTRA0A1W2PQU2 76 aa14.44□□□□□ -0.1
CDC42-204ENST00000411827 SMCO3A2RU48 225 aa14.44□□□□□ -0.1
CDC42-204ENST00000411827 NUDT19A8MXV4 375 aa14.44□□□□□ -0.1
CDC42-204ENST00000411827 HSPB1P04792 205 aaKnown RBP14.44□□□□□ -0.1
CDC42-204ENST00000411827 ZP3P21754 424 aa14.44□□□□□ -0.1
CDC42-204ENST00000411827 EIF2B2P49770 351 aaKnown RBP14.44□□□□□ -0.1
CDC42-204ENST00000411827 YPEL3P61236 119 aaPredicted RBP14.44□□□□□ -0.1
CDC42-204ENST00000411827 RELQ04864 619 aaPredicted RBP14.44□□□□□ -0.1
CDC42-204ENST00000411827 CD300CQ08708 224 aa14.44□□□□□ -0.1
CDC42-204ENST00000411827 SHISA2Q6UWI4 295 aa14.44□□□□□ -0.1
CDC42-204ENST00000411827 C3orf56Q8N813 242 aa14.44□□□□□ -0.1
CDC42-204ENST00000411827 SCGB1C1Q8TD33 95 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms