RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TRPM1Q7Z4N2 1603 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 THOC2Q8NI27 1593 aaKnown RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 SBNO2Q9Y2G9 1366 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 A0A096LPI6 279 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 DUXBA0A1W2PPF3 345 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 XKRY2A2RUG3 117 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 GOLGA6CA6NDK9 693 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 GOLGA6BA6NDN3 693 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 CXCR6O00574 342 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 STX16O14662 325 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 TXNDC12O95881 172 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 LDHAP00338 332 aaKnown RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 ISG15P05161 165 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 RPS17P08708 135 aaKnown RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 KRT7P08729 469 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 SULT1A3P0DMM9 295 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 SULT1A4P0DMN0 295 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR8G3PP0DMU2 310 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 TMEM11P17152 192 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 S100PP25815 95 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 CST5P28325 142 aaPredicted RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 KRT20P35900 424 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 ACADSBP45954 432 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 BDKRB1P46663 353 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 CD151P48509 253 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 CSE1LP55060 971 aaKnown RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 RHBDL3P58872 404 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 UBE2MP61081 183 aaKnown RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 POLR2LP62875 67 aaKnown RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 FADDQ13158 208 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 SNX1Q13596 522 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 RHEBQ15382 184 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 COQ5Q5HYK3 327 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 C6orf163Q5TEZ5 329 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 PRNTQ86SH4 94 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 TMEM251Q8N6I4 163 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 TCTEX1D1Q8N7M0 179 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 BCORP1Q8N888 145 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR1S1Q8NH92 325 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 GDAP1Q8TB36 358 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 GPR151Q8TDV0 419 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 ATL1Q8WXF7 558 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 UBXN10Q96LJ8 280 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 SCGB3A1Q96QR1 104 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 RNF2Q99496 336 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 ARV1Q9H2C2 271 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 GOLPH3LQ9H4A5 285 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 DPH3P1Q9H4G8 78 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 CXorf21Q9HAI6 301 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 CACYBPQ9HB71 228 aaKnown RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 PDRG1Q9NUG6 133 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 THUMPD1Q9NXG2 353 aaKnown RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 EURLQ9NYK6 297 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 MRPL36Q9P0J6 103 aaKnown RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 GHRLQ9UBU3 117 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 MRTO4Q9UKD2 239 aaKnown RBP-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 SLC35A3Q9Y2D2 325 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 V9GYV3 84 aa-2.57□□□□□ -2.82
RNU4-88P-201ENST00000411220 CUX2O14529 1486 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 ABCC12Q96J65 1359 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 LINC00862A6NCI5 91 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 SYCE1LA8MT33 242 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 TRDCB7Z8K6 153 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 E7EUB6 86 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 H0Y3Z8 333 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 EIF3HO15372 352 aaKnown RBP eCLIP-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 MOCS2O96007 188 aaPredicted RBP-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 CST1P01037 141 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 IVLP07476 585 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 HIST1H2AGP0C0S8 130 aaPredicted RBP-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 COX5AP20674 150 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 PEX2P28328 305 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 MARCKSL1P49006 195 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 MTCP1P56278 107 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 TAS2R60P59551 318 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 STX1BP61266 288 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 VBP1P61758 197 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 UBE2BP63146 152 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 HSPB3Q12988 150 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 RAB30Q15771 203 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 C12orf60Q5U649 245 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 KCNIP4Q6PIL6 250 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 KDELC1Q6UW63 502 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 RUFY3Q7L099 469 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 ERASQ7Z444 233 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 HIST2H2ABQ8IUE6 130 aaPredicted RBP-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 C4orf33Q8N1A6 199 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 ATPAF2Q8N5M1 289 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 STKLD1Q8NE28 680 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR5D14Q8NGL3 314 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 GRPEL2Q8TAA5 225 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 PIBF1Q8WXW3 757 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 CCL17Q92583 94 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 HIST1H2ACQ93077 130 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 PACRGQ96M98 296 aaPredicted RBP-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 AP1S3Q96PC3 154 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 WDR61Q9GZS3 305 aaKnown RBP-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 GAL3ST2Q9H3Q3 398 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 RBKSQ9H477 322 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 IFT22Q9H7X7 185 aa-2.58□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms