RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 HMGB3O15347 200 aaKnown RBP13.97□□□□□ -0.17
LRPPRC-203ENST00000409946 OR2C1O95371 312 aa13.97□□□□□ -0.17
LRPPRC-203ENST00000409946 FBP1P09467 338 aa13.97□□□□□ -0.17
LRPPRC-203ENST00000409946 ATP5IP56385 69 aaPredicted RBP13.97□□□□□ -0.17
LRPPRC-203ENST00000409946 PNRC1Q12796 327 aaPredicted RBP13.97□□□□□ -0.17
LRPPRC-203ENST00000409946 GAMTQ14353 236 aa13.97□□□□□ -0.17
LRPPRC-203ENST00000409946 SLC16A13Q7RTY0 426 aa13.97□□□□□ -0.17
LRPPRC-203ENST00000409946 OR2T6Q8NHC8 308 aa13.97□□□□□ -0.17
LRPPRC-203ENST00000409946 SLC25A22Q9H936 323 aa13.97□□□□□ -0.17
LRPPRC-203ENST00000409946 CSMD1Q96PZ7 3565 aa13.97□□□□□ -0.17
LRPPRC-203ENST00000409946 IGKV1OR2-108A0A075B7D4 117 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 ZFP92A6NM28 416 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 MPDU1O75352 247 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 AVPP01185 164 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 Q5PR19 223 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 FAM90A2PQ658T7 463 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 TEPPQ6URK8 271 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 LINC00518Q8N0U6 118 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 FAM24BQ8N5W8 94 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 OR10G9Q8NGN4 311 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 OR10G7Q8NGN6 311 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 ABHD5Q8WTS1 349 aa13.96□□□□□ -0.17
LRPPRC-203ENST00000409946 CTXND1A0A1B0GTU2 59 aa13.95□□□□□ -0.18
LRPPRC-203ENST00000409946 YIF1AO95070 293 aa13.95□□□□□ -0.18
LRPPRC-203ENST00000409946 OPRK1P41145 380 aa13.95□□□□□ -0.18
LRPPRC-203ENST00000409946 CEBPGP53567 150 aa13.95□□□□□ -0.18
LRPPRC-203ENST00000409946 FXYD3Q14802 87 aa13.95□□□□□ -0.18
LRPPRC-203ENST00000409946 MISP3Q96FF7 219 aa13.95□□□□□ -0.18
LRPPRC-203ENST00000409946 MRPL36Q9P0J6 103 aaKnown RBP13.95□□□□□ -0.18
LRPPRC-203ENST00000409946 PXMP4Q9Y6I8 212 aa13.95□□□□□ -0.18
LRPPRC-203ENST00000409946 A0A0U1RQK1 487 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 FNDC10F2Z333 226 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 FAM106CPP0CH98 169 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 SUB1P53999 127 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■■■■■ 31.6
LRPPRC-203ENST00000409946 NDPQ00604 133 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 C1QL4Q86Z23 238 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 ACY3Q96HD9 319 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 ACTR3CQ9C0K3 210 aaPredicted RBP13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 DMRT1Q9Y5R6 373 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 NBPF19A0A087WUL8 3843 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 BRS3P32247 399 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 TMEM144Q7Z5S9 345 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 MRPL41Q8IXM3 137 aaKnown RBP13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 ZFP82Q8N141 532 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 Q8N9W7 124 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 ZNF114Q8NC26 417 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 RNASEH2CQ8TDP1 164 aaKnown RBP13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 APCP25054 2843 aa13.94□□□□□ -0.18
LRPPRC-203ENST00000409946 IGHV3-21A0A0B4J1V1 117 aa13.93□□□□□ -0.18
LRPPRC-203ENST00000409946 TRAV20A0A0B4J274 112 aa13.93□□□□□ -0.18
LRPPRC-203ENST00000409946 KLF17Q5JT82 389 aaPredicted RBP13.93□□□□□ -0.18
LRPPRC-203ENST00000409946 LRRC75A-AS1Q8N1F1 130 aa13.93□□□□□ -0.18
LRPPRC-203ENST00000409946 LINC01356Q8N9X3 169 aa13.93□□□□□ -0.18
LRPPRC-203ENST00000409946 C2CD4CQ8TF44 421 aa13.93□□□□□ -0.18
LRPPRC-203ENST00000409946 SLC35E1Q96K37 410 aa13.93□□□□□ -0.18
LRPPRC-203ENST00000409946 TMEM242Q9NWH2 141 aa13.93□□□□□ -0.18
LRPPRC-203ENST00000409946 HELZ2Q9BYK8 2649 aaKnown RBP13.93□□□□□ -0.18
LRPPRC-203ENST00000409946 CX3CL1P78423 397 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 ACOT6Q3I5F7 207 aaPredicted RBP13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 KRTAP1-3Q8IUG1 177 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 STPG3Q8N7X2 389 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 F11RQ9Y624 299 aaKnown RBP13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 NAV2Q8IVL1 2488 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 CYB5BO43169 146 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 GATA2P23769 480 aaPredicted RBP13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 OR10J1P30954 320 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 GPX4P36969 197 aaPredicted RBP13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 B2MP61769 119 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 TMEM249Q2WGJ8 235 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 PVRIGQ6DKI7 326 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 Q96MF0 132 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 MANBALQ9NQG1 85 aa13.92□□□□□ -0.18
LRPPRC-203ENST00000409946 ZFHX3Q15911 3703 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 C5orf52A6NGY3 159 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 SH2D7A6NKC9 451 aaPredicted RBP13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 TMEM250H0YL14 139 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 PSMB3P49720 205 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 MEF2BQ02080 365 aaPredicted RBP13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 LOXL1Q08397 574 aaPredicted RBP13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 TMEM219Q86XT9 240 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 OR1P1Q8NH06 330 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 CACNG8Q8WXS5 425 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 NPIPB3Q92617 1050 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 ARPC1AQ92747 370 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 RAB24Q969Q5 203 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 SLC45A2Q9UMX9 530 aa13.91□□□□□ -0.18
LRPPRC-203ENST00000409946 SEC14L6B5MCN3 397 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 LINC00869P0C866 280 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 CDC34P49427 236 aaPredicted RBP13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 RND2P52198 227 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 PRR20EP86478 221 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 PRR20CP86479 221 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 PRR20DP86480 221 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 PRR20BP86481 221 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 PRR20AP86496 221 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 ASPHD1Q5U4P2 390 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 HSPB9Q9BQS6 159 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 SLC25A33Q9BSK2 321 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 WNT10AQ9GZT5 417 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 TMPRSS5Q9H3S3 457 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms