RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 FNDC10F2Z333 226 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 TRIM77I1YAP6 450 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 CRYGCP07315 174 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 GATA2P23769 480 aaPredicted RBP9.8□□□□□ -0.84
CHMP3-204ENST00000409727 OR10J1P30954 320 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 RAB31Q13636 194 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 TMEM41BQ5BJD5 291 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 GCSAMLQ5JQS6 135 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 PVRIGQ6DKI7 326 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 ETFRF1Q6IPR1 90 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 CENPVQ7Z7K6 275 aaPredicted RBP9.8□□□□□ -0.84
CHMP3-204ENST00000409727 SIGLECL1Q8N7X8 197 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 GSX1Q9H4S2 264 aaPredicted RBP9.8□□□□□ -0.84
CHMP3-204ENST00000409727 NOTCH2Q04721 2471 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 TLN2Q9Y4G6 2542 aa9.8□□□□□ -0.84
CHMP3-204ENST00000409727 ZFP92A6NM28 416 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 HMGB3O15347 200 aaKnown RBP9.79□□□□□ -0.84
CHMP3-204ENST00000409727 STPG3Q8N7X2 389 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 BPIFCQ8NFQ6 507 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 MYO9AB2RTY4 2548 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 ACANP16112 2415 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 I3L2K1 104 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 M0QZK8 103 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 OR2J3O76001 311 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 B2MP61769 119 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 SSX7Q7RTT5 188 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 SLC35E3Q7Z769 313 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 OR10G4Q8NGN3 311 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 OR10G9Q8NGN4 311 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 OR10G7Q8NGN6 311 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 OR5R1Q8NH85 324 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 SFT2D1Q8WV19 159 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 NOL4LQ96MY1 436 aaPredicted RBP9.79□□□□□ -0.84
CHMP3-204ENST00000409727 FANCD2OSQ96PS1 177 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 SLC25A22Q9H936 323 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 VPREB3Q9UKI3 123 aa9.79□□□□□ -0.84
CHMP3-204ENST00000409727 IGLV11-55A0A075B6I3 123 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 TRAV41A0A0B4J266 112 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 TSPAN15O95858 294 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 IGHV3-23P01764 117 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 H2AFB1P0C5Y9 115 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 FGF8P55075 233 aaPredicted RBP9.78□□□□□ -0.84
CHMP3-204ENST00000409727 ZNF90Q03938 601 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 ZNF726P1Q15940 193 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 FAM122CQ6P4D5 195 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 LCN15Q6UWW0 184 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 C16orf82Q7Z2V1 217 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 OR1L6Q8NGR2 347 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 MS4A10Q96PG2 267 aa9.78□□□□□ -0.84
CHMP3-204ENST00000409727 AKAP9Q99996 3911 aa9.77□□□□□ -0.85
CHMP3-204ENST00000409727 K7EIM0 57 aa9.77□□□□□ -0.85
CHMP3-204ENST00000409727 YIF1AO95070 293 aa9.77□□□□□ -0.85
CHMP3-204ENST00000409727 RPP25LQ8N5L8 163 aaKnown RBP9.77□□□□□ -0.85
CHMP3-204ENST00000409727 TEX29Q8N6K0 151 aa9.77□□□□□ -0.85
CHMP3-204ENST00000409727 FAM110DQ8TAY7 271 aaPredicted RBP9.77□□□□□ -0.85
CHMP3-204ENST00000409727 RCC1LQ96I51 464 aaKnown RBP9.77□□□□□ -0.85
CHMP3-204ENST00000409727 SLC39A9Q9NUM3 307 aa9.77□□□□□ -0.85
CHMP3-204ENST00000409727 IGKV1D-37A0A075B6S9 117 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 MFSD2BA6NFX1 497 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 CYB5BO43169 146 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 NDUFB8O95169 186 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 M6PRP20645 277 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 RPL29P47914 159 aaKnown RBP9.76□□□□□ -0.85
CHMP3-204ENST00000409727 ACOT6Q3I5F7 207 aaPredicted RBP9.76□□□□□ -0.85
CHMP3-204ENST00000409727 TMEM95Q3KNT9 176 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 AKIRIN2Q53H80 203 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 DPPA3Q6W0C5 159 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 CYP2G1PQ6ZSU1 146 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 MARC2Q969Z3 335 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 KCNIP2Q9NS61 270 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 FBXL7Q9UJT9 491 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 SLC45A2Q9UMX9 530 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 SONP18583 2426 aaKnown RBP9.76□□□□□ -0.85
CHMP3-204ENST00000409727 TCRBV4S1A1TA0A5B7 111 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 SOX15O60248 233 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 IGHG2P01859 326 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 MBP02144 154 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 LINC00869P0C866 280 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 HNF1AP20823 631 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 CCL20P78556 96 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 Q71RC1 249 aaPredicted RBP9.76□□□□□ -0.85
CHMP3-204ENST00000409727 TMEM116Q8NCL8 245 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 THYN1Q9P016 225 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 DOK5Q9P104 306 aa9.76□□□□□ -0.85
CHMP3-204ENST00000409727 LY6G6DO95868 133 aa9.75□□□□□ -0.85
CHMP3-204ENST00000409727 RHOGP84095 191 aa9.75□□□□□ -0.85
CHMP3-204ENST00000409727 SRSF3P84103 164 aaKnown RBP9.75□□□□□ -0.85
CHMP3-204ENST00000409727 PRR20EP86478 221 aa9.75□□□□□ -0.85
CHMP3-204ENST00000409727 PRR20CP86479 221 aa9.75□□□□□ -0.85
CHMP3-204ENST00000409727 PRR20DP86480 221 aa9.75□□□□□ -0.85
CHMP3-204ENST00000409727 PRR20BP86481 221 aa9.75□□□□□ -0.85
CHMP3-204ENST00000409727 PRR20AP86496 221 aa9.75□□□□□ -0.85
CHMP3-204ENST00000409727 RBMS3Q6XE24 437 aaKnown RBP9.75□□□□□ -0.85
CHMP3-204ENST00000409727 THAP8Q8NA92 274 aa9.75□□□□□ -0.85
CHMP3-204ENST00000409727 TMEM231Q9H6L2 316 aa9.75□□□□□ -0.85
CHMP3-204ENST00000409727 MED9Q9NWA0 146 aa9.75□□□□□ -0.85
CHMP3-204ENST00000409727 A0A1W2PPV4 95 aa9.74□□□□□ -0.85
CHMP3-204ENST00000409727 MAP1LC3B2A6NCE7 125 aa9.74□□□□□ -0.85
CHMP3-204ENST00000409727 CDC34P49427 236 aaPredicted RBP9.74□□□□□ -0.85
CHMP3-204ENST00000409727 C15orf32Q32M92 178 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms