RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 IAH1Q2TAA2 248 aaPredicted RBP3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 CLLU1Q5K131 121 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 BTNL8Q6UX41 500 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 ALKAL2Q6UX46 152 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 OR10G4Q8NGN3 311 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 TCTEX1D2Q8WW35 142 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 ATP5SQ99766 215 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 WDR61Q9GZS3 305 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 ARL6Q9H0F7 186 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 VCX2Q9H322 139 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 A0A087X0K7 114 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 FAM223BA6NKX1 122 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 CORTO00230 105 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 FCGR3BO75015 233 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 APOA2P02652 100 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 S100PP25815 95 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 S100GP29377 79 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 RPL29P47914 159 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 SULT1A2P50226 295 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 FXYD4P59646 89 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 YPEL3P61236 119 aaPredicted RBP3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 UBA52P62987 128 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 CD69Q07108 199 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 DEFB112Q30KQ8 113 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 FAM223AQ8IWN6 122 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 IL1F10Q8WWZ1 152 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 MRPL27Q9P0M9 148 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 ONECUT1Q9UBC0 465 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 USF3Q68DE3 2245 aa3.77□□□□□ -1.81
R3HDM1-203ENST00000409606 DNHD1Q96M86 4753 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 LGALS9O00182 355 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 CCSO14618 274 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 ARPC5O15511 151 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 SIX6O95475 246 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 FAM106CPP0CH98 169 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 NKX2-1P43699 371 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 TREML4Q6UXN2 200 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 ZNF695Q8IW36 515 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 BOLLQ8N9W6 283 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 SAT2Q96F10 170 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 NIT2Q9NQR4 276 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 FBN1P35555 2871 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 A0A1W2PPE3 182 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 TMEM238C9JI98 176 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 TNFSF12O43508 249 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 YIF1AO95070 293 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 IGKV1D-33P01593 117 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 IGKV1-33P01594 117 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 HIST1H1BP16401 226 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 ZNF726P1Q15940 193 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 SPSB3Q6PJ21 355 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 IL34Q6ZMJ4 242 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 TMED4Q7Z7H5 227 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 ZFP82Q8N141 532 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 BCL6BQ8N143 479 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 OR10X1Q8NGY0 326 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 C22orf15Q8WYQ4 148 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 H1FXQ92522 213 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 SLC35E1Q96K37 410 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 PACRGQ96M98 296 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 HARBI1Q96MB7 349 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 CCDC140Q96MF4 163 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 MGST2Q99735 147 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 TPPP3Q9BW30 176 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 SLC25A32Q9H2D1 315 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 MRPL36Q9P0J6 103 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 TMEM14CQ9P0S9 112 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 SOX21Q9Y651 276 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 ARHGAP32A7KAX9 2087 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 CBY3A6NI87 242 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 CA2P00918 260 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 OR5G3P0C626 314 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 RPL12P30050 165 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 SERF2P84101 59 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 VMA21Q3ZAQ7 101 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 TCTEX1D4Q5JR98 221 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 TMEM144Q7Z5S9 345 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 PDZD9Q8IXQ8 264 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 COMMD1Q8N668 190 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 ZNF418Q8TF45 676 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 C1RLQ9NZP8 487 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 RNF150Q9ULK6 438 aa3.76□□□□□ -1.81
R3HDM1-203ENST00000409606 FRAS1Q86XX4 4008 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 CFDP00746 253 aaPredicted RBP3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 FBP1P09467 338 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 IGLC1P0CG04 106 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 PJVKQ0ZLH3 352 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 FAM90A2PQ658T7 463 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 UBALD1Q8TB05 177 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 NEK7Q8TDX7 302 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 SRSF12Q8WXF0 261 aaKnown RBP3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 RNF125Q96EQ8 232 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 ZNF503Q96F45 646 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 FAM167A-AS1Q96KT0 104 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 PDCD10Q9BUL8 212 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 SEPSECSQ9HD40 501 aaKnown RBP3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 PARP11Q9NR21 331 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 PUS1Q9Y606 427 aaKnown RBP eCLIP3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 TRAV40A0A0B4J280 105 aa3.75□□□□□ -1.81
R3HDM1-203ENST00000409606 SOCS3O14543 225 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms