RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 C8orf46Q8TAG6 207 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 SLX1AQ9BQ83 275 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 SCN8AQ9UQD0 1980 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 SRSF4Q08170 494 aaKnown RBP13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 SOX21Q9Y651 276 aaPredicted RBP13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 IGHV1-3A0A0C4DH29 117 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 A0A1B0GW15 77 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 TCRBV4S1A1TA0A5B7 111 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 NPFFO15130 113 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 HIST1H1AQ02539 215 aaPredicted RBP13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 PLAURQ03405 335 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 SFRP2Q96HF1 295 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 HOXA5P20719 270 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 RHOGP84095 191 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 MUC6Q6W4X9 2439 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 TRAV41A0A0B4J266 112 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 HLA-DRB1P01911 266 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 QRFPP83859 136 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 ICAM4Q14773 271 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 FMC1Q96HJ9 113 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 SDF2L1Q9HCN8 221 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 EGR1P18146 543 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 CKS2P33552 79 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 FAM53AQ6NSI3 398 aaPredicted RBP13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 OR4D5Q8NGN0 318 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 WDR83OSQ9Y284 106 aa13.85□□□□□ -0.19
PCDHA13-202ENST00000409494 ABCA4P78363 2273 aa13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 CIARTQ8N365 385 aaPredicted RBP13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 OTORQ9NRC9 128 aa13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 NBASA2RRP1 2371 aa13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 COL5A1-AS1Q5SY13 56 aa13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 WFDC1Q9HC57 220 aa13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 ROS1P08922 2347 aa13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 RNF125Q96EQ8 232 aa13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 IGKV1D-17A0A075B6S4 117 aa13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 SNRPCP09234 159 aaKnown RBP13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 AREGP15514 252 aa13.84□□□□□ -0.19
PCDHA13-202ENST00000409494 BEND2Q8NDZ0 799 aa13.83□□□□□ -0.2
PCDHA13-202ENST00000409494 USMG5Q96IX5 58 aa13.83□□□□□ -0.2
PCDHA13-202ENST00000409494 J3QLI3 93 aa13.83□□□□□ -0.2
PCDHA13-202ENST00000409494 IGLV3-9A0A075B6K5 115 aa13.83□□□□□ -0.2
PCDHA13-202ENST00000409494 TRAV9-1A0A075B6T8 112 aa13.83□□□□□ -0.2
PCDHA13-202ENST00000409494 LEMD1Q68G75 181 aa13.83□□□□□ -0.2
PCDHA13-202ENST00000409494 GTF2H5Q6ZYL4 71 aa13.83□□□□□ -0.2
PCDHA13-202ENST00000409494 MAP1LC3AQ9H492 121 aa13.83□□□□□ -0.2
PCDHA13-202ENST00000409494 MBNL3Q9NUK0 354 aaKnown RBP13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 FAM215AQ9Y5M1 114 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 A0A1W2PRE2 83 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 BUB1B-PAK6H3BSN5 160 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 C5orf64Q2M2E5 130 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 OR4C46A6NHA9 309 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 PEX7O00628 323 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 AMY1AP04745 511 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 PRR30Q53SZ7 412 aaPredicted RBP13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 ZNF407Q9C0G0 2248 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 TFF3Q07654 80 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 REC114Q7Z4M0 266 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 KCNS1Q96KK3 526 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 ASCL2Q99929 193 aa13.82□□□□□ -0.2
PCDHA13-202ENST00000409494 LILRA1O75019 489 aa13.81□□□□□ -0.2
PCDHA13-202ENST00000409494 COQ2Q96H96 371 aa13.81□□□□□ -0.2
PCDHA13-202ENST00000409494 TECTAO75443 2155 aa13.81□□□□□ -0.2
PCDHA13-202ENST00000409494 COLCA2A8K830 154 aa13.81□□□□□ -0.2
PCDHA13-202ENST00000409494 AMMECR1LQ6DCA0 310 aa13.81□□□□□ -0.2
PCDHA13-202ENST00000409494 IGHV3-48P01763 117 aa13.81□□□□□ -0.2
PCDHA13-202ENST00000409494 MSMBP08118 114 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 COL8A2P25067 703 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 UBE2E1P51965 193 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 CCL20P78556 96 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 GRIFINA4D1Z8 144 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 Q1RN00 199 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 BPESC1Q9GZL8 116 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 IGHV3-35A0A0C4DH35 117 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 PSMB11A5LHX3 300 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 CGB1A6NKQ9 187 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 ASIPP42127 132 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 PAX8Q06710 450 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 PMCHL1Q16048 86 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 CENPWQ5EE01 88 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 RNF144BQ7Z419 303 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 FOXI3A8MTJ6 420 aaPredicted RBP13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 FNDC10F2Z333 226 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 UBE2L6O14933 153 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 RAMP3O60896 148 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 SPRY4Q9C004 299 aa13.8□□□□□ -0.2
PCDHA13-202ENST00000409494 UBE2CO00762 179 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 SELLP14151 372 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 FOLR2P14207 255 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 TRBV7-1A0A0A6YYK4 115 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 LINC00587B1AMM8 73 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 SRIP30626 198 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 LEPP41159 167 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 H0YJW9 148 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 DLX1P56177 255 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 PET117Q6UWS5 81 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 CBLN1P23435 193 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 RPL13AP40429 203 aaKnown RBP13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 SPATA45Q537H7 98 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 KIR2DL4Q99706 377 aa13.79□□□□□ -0.2
PCDHA13-202ENST00000409494 ZFP30Q9Y2G7 519 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms