RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 GNG5P63218 68 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 RTL8AQ9BWD3 113 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 COL27A1Q8IZC6 1860 aaPredicted RBP10.67□□□□□ -0.7
PTPRN-202ENST00000409251 IGHV3OR15-7A0A075B7D8 119 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 FAM181BA6NEQ2 426 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 KIR2DL2P43627 348 aaPredicted RBP10.67□□□□□ -0.7
PTPRN-202ENST00000409251 TEPPQ6URK8 271 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 FOXL2NBQ6ZUU3 175 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 WFDC3Q8IUB2 231 aa10.67□□□□□ -0.7
PTPRN-202ENST00000409251 ZCCHC24Q8N2G6 241 aaKnown RBP10.67□□□□□ -0.7
PTPRN-202ENST00000409251 F11RQ9Y624 299 aaKnown RBP10.67□□□□□ -0.7
PTPRN-202ENST00000409251 ANKHD1Q8IWZ3 2542 aaKnown RBP10.67□□□□□ -0.7
PTPRN-202ENST00000409251 IGKV3D-15A0A087WSY6 115 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 PIGBOS1A0A0B4J2F0 54 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 TMEM30CPA0ZSE6 113 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 AMY1AP04745 511 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 PYYP10082 97 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 FAM27E3Q08E93 113 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 TBC1D28Q2M2D7 210 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 TMEM136Q6ZRR5 245 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 OR52E5Q8NH55 327 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 NEUROG1Q92886 237 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 SARAFQ96BY9 339 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 C1QTNF5Q9BXJ0 243 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 ZNF391Q9UJN7 358 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 V9GYV3 84 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 HCFC1P51610 2035 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 STAG3L2P0CL84 134 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 STAG3L3P0CL85 134 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 SLC25A34Q6PIV7 304 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 OR13A1Q8NGR1 328 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 C18orf32Q8TCD1 76 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 RND1Q92730 232 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 SPSB4Q96A44 273 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 PGLYRP4Q96LB8 373 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 ZNF430Q9H8G1 570 aaPredicted RBP10.66□□□□□ -0.7
PTPRN-202ENST00000409251 TMPRSS2O15393 492 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 PSG9Q00887 426 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 CENPVQ7Z7K6 275 aaPredicted RBP10.66□□□□□ -0.7
PTPRN-202ENST00000409251 S1PR3Q99500 378 aa10.66□□□□□ -0.7
PTPRN-202ENST00000409251 H3BUT2 72 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 TIMM8AO60220 97 aaPredicted RBP10.65□□□□□ -0.7
PTPRN-202ENST00000409251 LEPROTL1O95214 131 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 HLA-DQA1P01909 254 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 ARR3P36575 388 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 VWC2Q2TAL6 325 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 FAM201AQ5SY85 155 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 OR8A1Q8NGG7 326 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 TMEM45BQ96B21 275 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 LOC389332A0A1B0GUA5 103 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 HIGD1CA8MV81 97 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 J3QT63 122 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 C5orf30Q96GV9 206 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 TMEM70Q9BUB7 260 aa10.65□□□□□ -0.7
PTPRN-202ENST00000409251 IGHV2-70DA0A0C4DH43 119 aa10.65□□□□□ -0.71
PTPRN-202ENST00000409251 NABP2Q9BQ15 211 aa10.65□□□□□ -0.71
PTPRN-202ENST00000409251 NPVFQ9HCQ7 196 aa10.65□□□□□ -0.71
PTPRN-202ENST00000409251 Q8N976 141 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 GNB1LQ9BYB4 327 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 POLDIP2Q9Y2S7 368 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 TRAV8-6A0A0B4J262 113 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 IGHV1-69-2A0A0G2JMI3 117 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 CHEK1O14757 476 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 CTRLP40313 264 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 CX3CL1P78423 397 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 WFDC12Q8WWY7 111 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 PROCRQ9UNN8 238 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 TCF19Q9Y242 345 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 FAM208BQ5VWN6 2430 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A26D6RGX4 464 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 ORM2P19652 201 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 C22orf34Q6ZV56 151 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 OR9G1Q8NH87 305 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 CORO2AQ92828 525 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 PRDM14Q9GZV8 571 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 TMEM140Q9NV12 185 aa10.64□□□□□ -0.71
PTPRN-202ENST00000409251 Q0VG73 95 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 BHLHA15Q7RTS1 189 aaPredicted RBP10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FLYWCH2Q96CP2 140 aaKnown RBP10.63□□□□□ -0.71
PTPRN-202ENST00000409251 GSX1Q9H4S2 264 aaPredicted RBP10.63□□□□□ -0.71
PTPRN-202ENST00000409251 ZNF835Q9Y2P0 537 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 TMEM238C9JI98 176 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 MT-ND6P03923 174 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 SMAGPQ0VAQ4 97 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 ZNF497Q6ZNH5 498 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 MTURNQ8N3F0 131 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 DSCAML1Q8TD84 2053 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 CSMD1Q96PZ7 3565 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 C7orf71A4D174 169 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A10PA6NDY2 464 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A18PA6NE21 464 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A16PA6NEW6 464 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A20PA6NIJ5 464 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A8PA6NJQ4 464 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A7PA6NKC0 464 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 PMS2P5A8MQ11 134 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A22PA8MWA6 464 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A12PA8MX19 464 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A5PA8MXJ8 464 aa10.63□□□□□ -0.71
PTPRN-202ENST00000409251 FAM90A23PA8MXZ1 464 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms