RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 AGFG2O95081 481 aa11.76□□□□□ -0.53
AFF3-202ENST00000409236 COL9A1P20849 921 aa11.76□□□□□ -0.53
AFF3-202ENST00000409236 C1orf100Q5SVJ3 147 aa11.76□□□□□ -0.53
AFF3-202ENST00000409236 ITLN2Q8WWU7 325 aaPredicted RBP11.76□□□□□ -0.53
AFF3-202ENST00000409236 ZNF708P17019 499 aa11.76□□□□□ -0.53
AFF3-202ENST00000409236 NANOS3P60323 173 aaKnown RBP11.76□□□□□ -0.53
AFF3-202ENST00000409236 ARRDC1-AS1Q9H2J1 176 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 A0A1W2PRE2 83 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 GUSBP1Q15486 140 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 MAFAQ8NHW3 353 aaPredicted RBP11.75□□□□□ -0.53
AFF3-202ENST00000409236 TEX43Q6ZNM6 134 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 SCARF2Q96GP6 870 aaPredicted RBP11.75□□□□□ -0.53
AFF3-202ENST00000409236 ZNF703Q9H7S9 590 aaPredicted RBP11.75□□□□□ -0.53
AFF3-202ENST00000409236 NGFRP08138 427 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 HEPN1Q6WQI6 88 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 TSKUQ8WUA8 353 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 LCTP09848 1927 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 MYMXA0A1B0GTQ4 84 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 UPK2O00526 184 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 TRGV3P03979 118 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 NPIPB3Q92617 1050 aa11.75□□□□□ -0.53
AFF3-202ENST00000409236 NPIPB13A6NJU9 1138 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 INS-IGF2F8WCM5 200 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 INSP01308 110 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 KIAA0040Q15053 153 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 SNHG12Q9BXW3 62 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 TRAV8-3A0A0A6YYJ7 113 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 ASPHD2Q6ICH7 369 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 GAGE12JA6NER3 117 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 GAGE1Q13065 139 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 GAGE4Q13068 117 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 GAGE5Q13069 117 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 GAGE6Q13070 117 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 RNASE7Q9H1E1 156 aaKnown RBP11.74□□□□□ -0.53
AFF3-202ENST00000409236 IGKV3-20P01619 116 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 ZNF114Q8NC26 417 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 RASL10AQ92737 203 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 DSCR8Q96T75 97 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 LHX9Q9NQ69 397 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 PSG1P11464 419 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 HIST3H2BBQ8N257 126 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 IFI27L2Q9H2X8 130 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 VEGFBP49765 207 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 RBM3P98179 157 aaKnown RBP11.74□□□□□ -0.53
AFF3-202ENST00000409236 PRR7Q8TB68 274 aa11.74□□□□□ -0.53
AFF3-202ENST00000409236 CT55Q8WUE5 264 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 DENND4CQ5VZ89 1909 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 TMEM54Q969K7 222 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 A0A1W2PQF6 199 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 H3BTX0 84 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 FCN3O75636 299 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 IGHG4P01861 327 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 CENPVQ7Z7K6 275 aaPredicted RBP11.73□□□□□ -0.53
AFF3-202ENST00000409236 CREBBPQ92793 2442 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 MALRD1Q5VYJ5 2156 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 CCL8P80075 99 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 ACTL10Q5JWF8 245 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 ABHD12Q8N2K0 398 aa11.73□□□□□ -0.53
AFF3-202ENST00000409236 EVI2AP22794 236 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 RPL23P62829 140 aaKnown RBP11.72□□□□□ -0.53
AFF3-202ENST00000409236 RPRMLQ8N4K4 120 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 FBLIM1Q8WUP2 373 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 J3QW42 95 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 TMEM126AQ9H061 195 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 C21orf62Q9NYP8 219 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 RSPO2Q6UXX9 243 aaPredicted RBP11.72□□□□□ -0.53
AFF3-202ENST00000409236 C1orf122Q6ZSJ8 110 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 SPATA25Q9BR10 227 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 PRADC1Q9BSG0 188 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 PILRBQ9UKJ0 227 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 IGHV1OR21-1A0A087WYE8 117 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 FOXA2Q9Y261 457 aaPredicted RBP11.72□□□□□ -0.53
AFF3-202ENST00000409236 DSCAML1Q8TD84 2053 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 C9JAW5 83 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 PVRIGQ6DKI7 326 aa11.72□□□□□ -0.53
AFF3-202ENST00000409236 LTBP4Q8N2S1 1624 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 IGHV3-72A0A0B4J1Y9 119 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 GTSCR1Q86UQ5 136 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 DUSP15Q9H1R2 295 aaPredicted RBP11.71□□□□□ -0.53
AFF3-202ENST00000409236 PAPPA2Q9BXP8 1791 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 FAM90A9PA6NNJ1 464 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 C1QAP02745 245 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 LINC01555Q8NAE3 123 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 RPUSD1Q9UJJ7 312 aaKnown RBP11.71□□□□□ -0.53
AFF3-202ENST00000409236 IL18BPO95998 194 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 CTGFP29279 349 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 TFF3Q07654 80 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 DLL3Q9NYJ7 618 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 YBX2Q9Y2T7 364 aaKnown RBP11.71□□□□□ -0.53
AFF3-202ENST00000409236 TRBV5-7A0A0A0MS05 114 aa11.71□□□□□ -0.53
AFF3-202ENST00000409236 DUSP14O95147 198 aaKnown RBP11.71□□□□□ -0.53
AFF3-202ENST00000409236 CCL19Q99731 98 aa11.71□□□□□ -0.54
AFF3-202ENST00000409236 SLC25A39Q9BZJ4 359 aaPredicted RBP11.71□□□□□ -0.54
AFF3-202ENST00000409236 CT62P0C5K7 136 aa11.71□□□□□ -0.54
AFF3-202ENST00000409236 FOXL1Q12952 345 aa11.71□□□□□ -0.54
AFF3-202ENST00000409236 WFDC6Q9BQY6 131 aa11.71□□□□□ -0.54
AFF3-202ENST00000409236 COX5BP10606 129 aa11.71□□□□□ -0.54
AFF3-202ENST00000409236 ERCC8Q13216 396 aa11.71□□□□□ -0.54
AFF3-202ENST00000409236 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.54
AFF3-202ENST00000409236 TIMM21Q9BVV7 248 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms