RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 LSM5Q9Y4Y9 91 aaKnown RBP1.57□□□□□ -2.16
PTPN12-202ENST00000407343 SETD5Q9C0A6 1442 aa1.57□□□□□ -2.16
PTPN12-202ENST00000407343 CCDC88AQ3V6T2 1871 aa1.56□□□□□ -2.16
PTPN12-202ENST00000407343 PEG3Q9GZU2 1588 aa1.56□□□□□ -2.16
PTPN12-202ENST00000407343 IFNA21P01568 189 aa1.56□□□□□ -2.16
PTPN12-202ENST00000407343 RPL5P46777 297 aaKnown RBP1.56□□□□□ -2.16
PTPN12-202ENST00000407343 TAS2R41P59536 307 aa1.56□□□□□ -2.16
PTPN12-202ENST00000407343 TFAMQ00059 246 aaKnown RBP1.56□□□□□ -2.16
PTPN12-202ENST00000407343 ZNF345Q14585 488 aa1.56□□□□□ -2.16
PTPN12-202ENST00000407343 ACOT6Q3I5F7 207 aaPredicted RBP1.56□□□□□ -2.16
PTPN12-202ENST00000407343 LIN52Q52LA3 116 aa1.56□□□□□ -2.16
PTPN12-202ENST00000407343 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.56□□□□□ -2.16
PTPN12-202ENST00000407343 OR10J5Q8NHC4 309 aa1.56□□□□□ -2.16
PTPN12-202ENST00000407343 RASSF5Q8WWW0 418 aa1.56□□□□□ -2.16
PTPN12-202ENST00000407343 DERL1Q9BUN8 251 aa1.56□□□□□ -2.16
PTPN12-202ENST00000407343 WDR61Q9GZS3 305 aaKnown RBP1.56□□□□□ -2.16
PTPN12-202ENST00000407343 NCOA1Q15788 1441 aa1.56□□□□□ -2.16
PTPN12-202ENST00000407343 OR4C46A6NHA9 309 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 FABP5P3A8MUU1 101 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 OR7C1O76099 320 aaPredicted RBP1.55□□□□□ -2.16
PTPN12-202ENST00000407343 DHFRP00374 187 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 IGKV1-5P01602 117 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 SERPINB1P30740 379 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 GNG3P63215 75 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 HIST1H3AP68431 136 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 H3F3AP84243 136 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 CDK5R1Q15078 307 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 CDK10Q15131 360 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 C3orf33Q6P1S2 294 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 SMIM20Q8N5G0 67 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 CMSS1Q9BQ75 279 aaKnown RBP1.55□□□□□ -2.16
PTPN12-202ENST00000407343 NMNAT1Q9HAN9 279 aaPredicted RBP1.55□□□□□ -2.16
PTPN12-202ENST00000407343 PKIGQ9Y2B9 76 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 UFC1Q9Y3C8 167 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 DLG5Q8TDM6 1919 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 WRNQ14191 1432 aaPredicted RBP eCLIP1.55□□□□□ -2.16
PTPN12-202ENST00000407343 NCOA3Q9Y6Q9 1424 aa1.55□□□□□ -2.16
PTPN12-202ENST00000407343 A0A1B0GV50 99 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 EXOC1LA0A1B0GW35 172 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 PQLC2LA1A4F0 135 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 IRGMA1A4Y4 181 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 FAAHO00519 579 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 IFNA1P01562 189 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 CD79AP11912 226 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 RPS4Y1P22090 263 aaKnown RBP1.54□□□□□ -2.16
PTPN12-202ENST00000407343 NFYAP23511 347 aaPredicted RBP1.54□□□□□ -2.16
PTPN12-202ENST00000407343 GRK1Q15835 563 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 Q6ZS49 121 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 C12orf29Q8N999 325 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 OR10K1Q8NGX5 313 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 DYDC1Q8WWB3 177 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 BTF3L4Q96K17 158 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 PPP1R2P1Q96PQ5 205 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 GINS3Q9BRX5 216 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 TRIM4Q9C037 500 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 C6orf62Q9GZU0 229 aaPredicted RBP1.54□□□□□ -2.16
PTPN12-202ENST00000407343 MIXL1Q9H2W2 232 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 FAM96AQ9H5X1 160 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 ENY2Q9NPA8 101 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 MED9Q9NWA0 146 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 OPTCQ9UBM4 332 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 ERGIC3Q9Y282 383 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 SLC35A3Q9Y2D2 325 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 FAM32AQ9Y421 112 aaKnown RBP1.54□□□□□ -2.16
PTPN12-202ENST00000407343 PIK3C2GO75747 1445 aa1.54□□□□□ -2.16
PTPN12-202ENST00000407343 FAM236DA0A1B0GTK5 79 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 SYNMO15061 1565 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 NUP155O75694 1391 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 TTRP02766 147 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 FAM236CP0DP71 79 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 RNASE3P12724 160 aaKnown RBP1.53□□□□□ -2.16
PTPN12-202ENST00000407343 HIST1H1TP22492 207 aaPredicted RBP1.53□□□□□ -2.16
PTPN12-202ENST00000407343 MTUS2Q5JR59 1369 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 AADACL3Q5VUY0 350 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 TEX36Q5VZQ5 186 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 LPCAT3Q6P1A2 487 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 TMEM35BQ8NCS4 154 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 OR52L1Q8NGH7 329 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 OR51A2Q8NGJ7 313 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 OR13D1Q8NGV5 346 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 BORCS7Q96B45 105 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 DCUN1D1Q96GG9 259 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 OR52E6Q96RD3 313 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 KIFC1Q9BW19 673 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 FAM107BQ9H098 131 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 BIN3Q9NQY0 253 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 MRPL27Q9P0M9 148 aaKnown RBP1.53□□□□□ -2.16
PTPN12-202ENST00000407343 SS18L2Q9UHA2 77 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 GINS2Q9Y248 185 aa1.53□□□□□ -2.16
PTPN12-202ENST00000407343 UTP11Q9Y3A2 253 aaKnown RBP1.53□□□□□ -2.16
PTPN12-202ENST00000407343 SOX21Q9Y651 276 aaPredicted RBP1.53□□□□□ -2.16
PTPN12-202ENST00000407343 MICAL3Q7RTP6 2002 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 COL4A5P29400 1685 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 PPP5D1E7EU14 171 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 GPR31O00270 319 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 ARPC5O15511 151 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 ATG12O94817 140 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 PMP2P02689 132 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 SHBGP04278 402 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 CRHP06850 196 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms