RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
LINC00544-201ENST00000400540 FNDC4Q9H6D8 234 aaPredicted RBP8.6□□□□□ -1.03
LINC00544-201ENST00000400540 M0R2N4 97 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 RTL8CO15255 209 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 RNASE2P10153 161 aaKnown RBP8.59□□□□□ -1.03
LINC00544-201ENST00000400540 NPPCP23582 126 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 RPS19P39019 145 aaKnown RBP8.59□□□□□ -1.03
LINC00544-201ENST00000400540 MLANAQ16655 118 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 C12orf74Q32Q52 190 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 PVRIGQ6DKI7 326 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 MORN3Q6PF18 240 aaPredicted RBP8.59□□□□□ -1.03
LINC00544-201ENST00000400540 SLC35G3Q8N808 338 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 GPX8Q8TED1 209 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 DCANP1Q8TF63 244 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 TMEM231Q9H6L2 316 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 TBC1D24Q9ULP9 559 aa8.59□□□□□ -1.03
LINC00544-201ENST00000400540 NACAE9PAV3 2078 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 DEFB131BA0A096LNP1 70 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 A0A0B4J293 547 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 PRSS29PA6NIE9 313 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 AMBPP02760 352 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 P0C879 139 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 PI3P19957 117 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 CRYBB3P26998 211 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 S100GP29377 79 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 SNCAP37840 140 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 LSM3P62310 102 aaKnown RBP8.58□□□□□ -1.04
LINC00544-201ENST00000400540 TIGITQ495A1 244 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 TMEM41BQ5BJD5 291 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 LCE2DQ5TA82 110 aaPredicted RBP8.58□□□□□ -1.04
LINC00544-201ENST00000400540 LPCAT3Q6P1A2 487 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 GRAMD2BQ96HH9 432 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 METTL26Q96S19 204 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 TP53RKQ96S44 253 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 RNF126Q9BV68 326 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 LRP1BQ9NZR2 4599 aa8.58□□□□□ -1.04
LINC00544-201ENST00000400540 A0A1W2PS18 150 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 M0QYG6 137 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 TMEM127O75204 238 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 CLN5O75503 358 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 IFNA17P01571 189 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 MED14OSP0DP75 135 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 OPRK1P41145 380 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 ETV6P41212 452 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 UCP3P55916 312 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 PSMG4Q5JS54 123 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 SNX29P2Q8IUI4 249 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 CROCCP3Q8IVE0 287 aa8.57□□□□□ -1.04
LINC00544-201ENST00000400540 YTHDF1Q9BYJ9 559 aaKnown RBP8.57□□□□□ -1.04
LINC00544-201ENST00000400540 A0A0G2JRQ6 117 aa8.56□□□□□ -1.04
LINC00544-201ENST00000400540 INS-IGF2F8WCM5 200 aa8.56□□□□□ -1.04
LINC00544-201ENST00000400540 IGKV1-17P01599 117 aa8.56□□□□□ -1.04
LINC00544-201ENST00000400540 HOXA1P49639 335 aaPredicted RBP8.56□□□□□ -1.04
LINC00544-201ENST00000400540 AKR1C2P52895 323 aa8.56□□□□□ -1.04
LINC00544-201ENST00000400540 DHRS2Q13268 280 aa8.56□□□□□ -1.04
LINC00544-201ENST00000400540 RNASE12Q5GAN4 147 aaKnown RBP8.56□□□□□ -1.04
LINC00544-201ENST00000400540 POM121L12Q8N7R1 296 aa8.56□□□□□ -1.04
LINC00544-201ENST00000400540 OR4X1Q8NH49 305 aa8.56□□□□□ -1.04
LINC00544-201ENST00000400540 TMEM230Q96A57 120 aa8.56□□□□□ -1.04
LINC00544-201ENST00000400540 RAB40CQ96S21 281 aa8.56□□□□□ -1.04
LINC00544-201ENST00000400540 APOBP04114 4563 aaKnown RBP8.55□□□□□ -1.04
LINC00544-201ENST00000400540 HELTA6NFD8 242 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 CORTO00230 105 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 ATP6V1G2O95670 118 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 PGAM2P15259 253 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 RCVRNP35243 200 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 PIGPP57054 158 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 RND3P61587 244 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 CENPSQ8N2Z9 138 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 GLMPQ8WWB7 406 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 NDUFAF3Q9BU61 184 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 PDCD10Q9BUL8 212 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 Q9H521 79 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 XCL2Q9UBD3 114 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 COMMD3Q9UBI1 195 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 U3KQE9 123 aa8.55□□□□□ -1.04
LINC00544-201ENST00000400540 P0DMU3 169 aa8.54□□□□□ -1.04
LINC00544-201ENST00000400540 FAM231AP0DMU4 169 aa8.54□□□□□ -1.04
LINC00544-201ENST00000400540 FAM231CP0DMU5 169 aa8.54□□□□□ -1.04
LINC00544-201ENST00000400540 SUB1P53999 127 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC00544-201ENST00000400540 BSXQ3C1V8 233 aa8.54□□□□□ -1.04
LINC00544-201ENST00000400540 SP6Q3SY56 376 aa8.54□□□□□ -1.04
LINC00544-201ENST00000400540 C16orf54Q6UWD8 224 aa8.54□□□□□ -1.04
LINC00544-201ENST00000400540 LHFPL1Q86WI0 220 aa8.54□□□□□ -1.04
LINC00544-201ENST00000400540 YIPF6Q96EC8 236 aa8.54□□□□□ -1.04
LINC00544-201ENST00000400540 NARS2Q96I59 477 aaKnown RBP8.54□□□□□ -1.04
LINC00544-201ENST00000400540 KRTAP4-5Q9BYR2 181 aa8.54□□□□□ -1.04
LINC00544-201ENST00000400540 SCPEP1Q9HB40 452 aa8.54□□□□□ -1.04
LINC00544-201ENST00000400540 IGLV2-18A0A075B6J9 118 aa8.53□□□□□ -1.04
LINC00544-201ENST00000400540 C3orf85A0A1B0GTC6 90 aa8.53□□□□□ -1.04
LINC00544-201ENST00000400540 FAM90A26D6RGX4 464 aa8.53□□□□□ -1.04
LINC00544-201ENST00000400540 HNRNPCP07910 306 aaKnown RBP eCLIP8.53□□□□□ -1.04
LINC00544-201ENST00000400540 IGLC1P0CG04 106 aa8.53□□□□□ -1.04
LINC00544-201ENST00000400540 ELK1P19419 428 aa8.53□□□□□ -1.04
LINC00544-201ENST00000400540 DEFB1P60022 68 aa8.53□□□□□ -1.04
LINC00544-201ENST00000400540 USF2Q15853 346 aaPredicted RBP8.53□□□□□ -1.04
LINC00544-201ENST00000400540 TRIM16LQ309B1 348 aa8.53□□□□□ -1.04
LINC00544-201ENST00000400540 KCTD21Q4G0X4 260 aa8.53□□□□□ -1.04
LINC00544-201ENST00000400540 Q6ZRM9 215 aa8.53□□□□□ -1.04
LINC00544-201ENST00000400540 ENY2Q9NPA8 101 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms