RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 LOC105371267A0A1B0GV96 52 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 SPXQ9BT56 116 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 JPT1Q9UK76 154 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 MMP23AO75900 390 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 RASL10AQ92737 203 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 IMMP1LQ96LU5 166 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 ASCL2Q99929 193 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 SLC50A1Q9BRV3 221 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 MORN5Q5VZ52 161 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 ATRAIDQ6UW56 229 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 SS18L2Q9UHA2 77 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 EGR2P11161 476 aaPredicted RBP10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 TEX43Q6ZNM6 134 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 MCRIP2Q9BUT9 160 aaKnown RBP10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 UCNP55089 124 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 MPV17L2Q567V2 206 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 ARPC1AQ92747 370 aa10.5□□□□□ -0.73
CACNA1C-209ENST00000399603 AKAP11Q9UKA4 1901 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 IGHV1-69-2A0A0G2JMI3 117 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 A0A1W2PQD3 144 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 CGB7P0DN87 165 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 PRIMA1Q86XR5 153 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 WFDC9Q8NEX5 89 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 TRBV20-1A0A075B6N2 111 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 NDUFC2O95298 119 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 CEACAM8P31997 349 aaPredicted RBP10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 TMEM144Q7Z5S9 345 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 POLEQ07864 2286 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 ZNF708P17019 499 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 PLEKHB2Q96CS7 222 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 ANKRD36CQ5JPF3 1778 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 TNFSF13O75888 250 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 ASPHD2Q6ICH7 369 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 USP54Q70EL1 1684 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 NDUFA2O43678 99 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 PCOLCEQ15113 449 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 KCNK17Q96T54 332 aa10.49□□□□□ -0.73
CACNA1C-209ENST00000399603 FOXS1O43638 330 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 NDUFS6O75380 124 aaKnown RBP10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 NBL1P41271 181 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 PPP1R3EQ9H7J1 279 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 TSSC4Q9Y5U2 329 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 ATRXP46100 2492 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 TRBV5-3A0A0A0MS03 114 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 TINCRA0A1B0GVN0 87 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 IFITM2Q01629 132 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 FAM90A18PA6NE21 464 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 FAM90A16PA6NEW6 464 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 MSGN1A6NI15 193 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 FAM90A9PA6NNJ1 464 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 FAM90A5PA8MXJ8 464 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 FAM90A15PP0C7V4 464 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 FAM90A14PP0C7W9 464 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 FAM90A2PQ658T7 463 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 AQP3Q92482 292 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 PRDM6Q9NQX0 595 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 PILRBQ9UKJ0 227 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 CENPVL1A0A0U1RR11 272 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 SELLP14151 372 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 UBE2V1Q13404 147 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 RREB1Q92766 1687 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 KIAA2026Q5HYC2 2103 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 FAM27BQ5VT28 67 aa10.48□□□□□ -0.73
CACNA1C-209ENST00000399603 CGB3P0DN86 165 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 PYYP10082 97 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 PMVKQ15126 192 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 OTORQ9NRC9 128 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 ERCC8Q13216 396 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 OR13A1Q8NGR1 328 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 RCHY1Q96PM5 261 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 LCN12Q6JVE5 192 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 KLF14Q8TD94 323 aaPredicted RBP10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 RALGAPA1Q6GYQ0 2036 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 TRAV12-2A0A075B6T6 113 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 TRGV1A0A0A0MS02 117 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 CD24P25063 80 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 RNF115Q9Y4L5 304 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 FOXH1O75593 365 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 ISXQ2M1V0 245 aa10.47□□□□□ -0.73
CACNA1C-209ENST00000399603 D6R8Y8 96 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 RPL35AP18077 110 aaKnown RBP10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 IGHV5-10-1A0A0J9YXX1 117 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 AMELYQ99218 206 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 ZNF703Q9H7S9 590 aaPredicted RBP10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST1H2BKO60814 126 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST1H2BJP06899 126 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST1H2BOP23527 126 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST1H2BBP33778 126 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST1H2BDP58876 126 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST1H2BCP62807 126 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST2H2BEQ16778 126 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 NRN1LQ496H8 165 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 SLC22A18ASQ8N1D0 253 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 LINC01560Q8TB33 94 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST1H2BHQ93079 126 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST1H2BNQ99877 126 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 HIST1H2BMQ99879 126 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 DEPPQ9NTK1 212 aa10.46□□□□□ -0.73
CACNA1C-209ENST00000399603 TRGV11A0A075B6L2 103 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms