RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 UFC1Q9Y3C8 167 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 RNF115Q9Y4L5 304 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 C1orf185Q5T7R7 199 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 TREML4Q6UXN2 200 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 RPEQ96AT9 228 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 MCRIP2Q9BUT9 160 aaKnown RBP12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 NCOA6Q14686 2063 aaPredicted RBP12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 PEX7O00628 323 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 NUPR1O60356 82 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 TEX43Q6ZNM6 134 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 GGTLC1Q9BX51 225 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 MRPS18CQ9Y3D5 142 aaKnown RBP12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 IGHV3-72A0A0B4J1Y9 119 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 NDUFS8O00217 210 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 CCL25O15444 150 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 HCP5Q6MZN7 132 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 TSKUQ8WUA8 353 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 ZNF414Q96IQ9 312 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 SEPSECSQ9HD40 501 aaKnown RBP12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 CALYQ9NYX4 217 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 USF3Q68DE3 2245 aa12.14□□□□□ -0.47
RPRD1A-202ENST00000399022 CD59P13987 128 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 RPL7P18124 248 aaKnown RBP12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 C9orf106Q8NAJ2 232 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 OR13A1Q8NGR1 328 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 C5orf30Q96GV9 206 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 HIST1H4GQ99525 98 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 SPRR3Q9UBC9 169 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 CACNA1BQ00975 2339 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 Q0VG73 95 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 ZNF114Q8NC26 417 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 C19orf24Q9BVV8 132 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 ARHGAP21Q5T5U3 1957 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 CX3CL1P78423 397 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 WFDC3Q8IUB2 231 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 SIGMAR1Q99720 223 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 GTSF1LQ9H1H1 148 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 LTBP2Q14767 1821 aa12.13□□□□□ -0.47
RPRD1A-202ENST00000399022 A0A1W2PRE2 83 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 PSMB2P49721 201 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 SLC25A33Q9BSK2 321 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 SLC25A10Q9UBX3 287 aaPredicted RBP12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 S100A4P26447 101 aaKnown RBP12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 TNFRSF19Q9NS68 423 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 ZNF257Q9Y2Q1 563 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 A0A1B0GWB2 263 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 MYOZ3Q8TDC0 251 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 ZNF785A8K8V0 405 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 SLC25A17O43808 307 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 RPL30P62888 115 aaKnown RBP12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 FAM27E3Q08E93 113 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 SNRNP40Q96DI7 357 aaKnown RBP12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 PYGO2Q9BRQ0 406 aa12.12□□□□□ -0.47
RPRD1A-202ENST00000399022 NCBP2LA6PVI3 153 aaKnown RBP12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 NTF4P34130 210 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 ACP7Q6ZNF0 438 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 GOLT1AQ6ZVE7 132 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 IGKV3D-15A0A087WSY6 115 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 OR9G9P0C7N8 305 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 YPEL3P61236 119 aaPredicted RBP12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 TWIST1Q15672 202 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 RASL11BQ9BPW5 248 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 CHODLQ9H9P2 273 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 TRAV8-6A0A0B4J262 113 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 F2Z2F3 143 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 DLL1O00548 723 aa12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 RPL11P62913 178 aaKnown RBP12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 MRPL32Q9BYC8 188 aaKnown RBP12.11□□□□□ -0.47
RPRD1A-202ENST00000399022 IGKV1-6A0A0C4DH72 117 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 FOXH1O75593 365 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 CD3EP07766 207 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 SEC11AP67812 179 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 RSPO1Q2MKA7 263 aaPredicted RBP12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 C9JCJ5 164 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 ETV2O00321 342 aaPredicted RBP12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 CD40P25942 277 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 GNG5P63218 68 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 RPP21Q9H633 154 aaKnown RBP12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 HIGD1AQ9Y241 93 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 PPIAL4EA0A075B759 164 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 IGHV2OR16-5A0A0B4J2B6 119 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 TMEM189A5PLL7 270 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 PPIAL4FP0DN26 164 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 SRSF6Q13247 344 aaKnown RBP12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 TMEM186Q96B77 213 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 IL18BPO95998 194 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 NBEAP1P0C6P0 100 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 KIR2DL2P43627 348 aaPredicted RBP12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 CDKN1BP46527 198 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 ZNF146Q15072 292 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 C20orf204Q6ZNR8 217 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 PRR14LQ5THK1 2151 aa12.1□□□□□ -0.47
RPRD1A-202ENST00000399022 GTF3C1Q12789 2109 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 MOSP00540 346 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 PYYP10082 97 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 HOXA4Q00056 320 aaPredicted RBP12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 LINC00305Q7Z4B0 112 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms