RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ACTL10Q5JWF8 245 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 ORAOV1Q8WV07 137 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 MTCL1Q9Y4B5 1905 aaKnown RBP6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 TBX6O95947 436 aaPredicted RBP6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 GAS1P54826 345 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 PLAURQ03405 335 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 GFI1Q99684 422 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 GFRA4Q9GZZ7 299 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 IGKV1-9A0A0C4DH69 117 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 ZNF688P0C7X2 276 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 FOXL2NBQ6ZUU3 175 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 STHQ8IWL8 128 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 WFDC1Q9HC57 220 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 PLSCR4Q9NRQ2 329 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 TRBV7-1A0A0A6YYK4 115 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 IGKV1D-13A0A0B4J2D9 117 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 NDUFA3O95167 84 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 IGKV1-13P0DP09 117 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 LAGE3Q14657 143 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 C3orf36Q3SXR2 165 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 TEX38Q6PEX7 206 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 SIGLEC15Q6ZMC9 328 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 PAQR4Q8N4S7 273 aaPredicted RBP6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 IGHV3-23P01764 117 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 MBNL3Q9NUK0 354 aaKnown RBP6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 TRAV8-4A0A0B4J246 113 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 FAM223BA6NKX1 122 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 ITGB1BP1O14713 200 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 FOXA3P55318 350 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 C21orf62-AS1Q17RA5 79 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 LDLRAD2Q5SZI1 272 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 FAM223AQ8IWN6 122 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 NABP1Q96AH0 204 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 RNASE1P07998 156 aaKnown RBP6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 SNRPCP09234 159 aaKnown RBP6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 RSPO4Q2I0M5 234 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 ZNF418Q8TF45 676 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 ANK1P16157 1881 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 ATXN7O15265 892 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 C18orf15Q96N68 181 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 C11orf68Q9H3H3 251 aaKnown RBP6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 MRPL27Q9P0M9 148 aaKnown RBP6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 LCTP09848 1927 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 TNFSF13O75888 250 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 WNT2P09544 360 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 MORN3Q6PF18 240 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 ITLN2Q8WWU7 325 aaPredicted RBP6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 PLEKHB2Q96CS7 222 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 TRPM6Q9BX84 2022 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 TRBV7-9A0A0J9YWB2 115 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 EGR1P18146 543 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 MALP21145 153 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 PLNP26678 52 aa6.94□□□□□ -1.3
SPTLC3-201ENST00000399002 TMEM238C9JI98 176 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 COQ2Q96H96 371 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 CYTL1Q9NRR1 136 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 BEX4Q9NWD9 120 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 SPRR3Q9UBC9 169 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 CELA3BP08861 270 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 TDGF1P13385 188 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 ZNF362Q5T0B9 420 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 KIR3DL3Q8N743 410 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 VWCEQ96DN2 955 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 C14orf144Q96I85 54 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 GBF1Q92538 1859 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 RAMP3O60896 148 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 CLPSP04118 112 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 FBLN7Q53RD9 439 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 C20orf204Q6ZNR8 217 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 SPANXDQ9BXN6 97 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 RNASE7Q9H1E1 156 aaKnown RBP6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 PLXNA3P51805 1871 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 SRRM5B3KS81 715 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST1H2BKO60814 126 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 NDUFS6O75380 124 aaKnown RBP6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 CA1P00915 261 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST1H2BJP06899 126 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST1H2BOP23527 126 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST1H2BBP33778 126 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST1H2BDP58876 126 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST1H2BCP62807 126 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 PAX8Q06710 450 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST2H2BEQ16778 126 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 C17orf82Q86X59 251 aaPredicted RBP6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST1H2BHQ93079 126 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST1H2BNQ99877 126 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST1H2BMQ99879 126 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 SPANXA1Q9NS26 97 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 ZNHIT1O43257 154 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 IGHV1-46P01743 117 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 CD7P09564 240 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 GNG5P63218 68 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 TREML4Q6UXN2 200 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 C7orf69Q9H7B7 122 aa6.93□□□□□ -1.3
SPTLC3-201ENST00000399002 PCP4P48539 62 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 ATXN8Q156A1 80 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 GGNQ86UU5 652 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST3H2BBQ8N257 126 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 RPUSD1Q9UJJ7 312 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms