RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 MAFAQ8NHW3 353 aaPredicted RBP8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 RND1Q92730 232 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 BCL2L2Q92843 193 aaPredicted RBP8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 FAM173AQ9BQD7 235 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 SMG1Q96Q15 3661 aaKnown RBP8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 IGKV1OR2-108A0A075B7D4 117 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 OR10W1Q8NGF6 305 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 JMJD8Q96S16 334 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 TNFRSF19Q9NS68 423 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 LSM4Q9Y4Z0 139 aaKnown RBP8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 TRAV9-1A0A075B6T8 112 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 A0A087X0K7 114 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 IGHV2-26A0A0B4J1V2 119 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 IGLC7A0M8Q6 106 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 HIGD1CA8MV81 97 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 AREGP15514 252 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 PRDX2P32119 198 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 UQCRFS1P47985 274 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 WDR82Q6UXN9 313 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 CD177Q8N6Q3 437 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 TMEM105Q8N8V8 129 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 NUP35Q8NFH5 326 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 OR2Z1Q8NG97 314 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 ZNF503Q96F45 646 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 OSTCQ9NRP0 149 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 APOA2P02652 100 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 LINC00869P0C866 280 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 CDKN1BP46527 198 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 RIPPLY3P57055 190 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 GABRA6Q16445 453 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 MORN2Q502X0 79 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 SNRNP40Q96DI7 357 aaKnown RBP8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 TMEM167BQ9NRX6 74 aa8.08□□□□□ -1.12
PTCHD4-202ENST00000398738 KMT2EQ8IZD2 1858 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 IZUMO1RA6ND01 250 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 C22orf46C9J442 243 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 J3QR06 171 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 APELAP0DMC3 54 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 C11orf53Q8IXP5 236 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 OR4F17Q8NGA8 305 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 OR8B3Q8NGG8 313 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 C11orf52Q96A22 123 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 OR51B2Q9Y5P1 312 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 DYSFO75923 2080 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 CFAP47Q6ZTR5 3102 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 TET2Q6N021 2002 aaPredicted RBP8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 IGHV2-70DA0A0C4DH43 119 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 PRSS46E5RG02 174 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 ISLRO14498 428 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 ITGB1BP1O14713 200 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 IGLV2-8P01709 118 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 ZNF766Q5HY98 468 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 NUDT10Q8NFP7 164 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 NUDT11Q96G61 164 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 CST9LQ9H4G1 147 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 ABI3Q9P2A4 366 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 MRPS16Q9Y3D3 137 aaKnown RBP8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 AMMECR1Q9Y4X0 333 aaPredicted RBP8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 PKDREJQ9NTG1 2253 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 IGHV1-69-2A0A0G2JMI3 117 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 HSPE1P61604 102 aaKnown RBP8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 SMIM21Q3B7S5 101 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 TMEM70Q9BUB7 260 aa8.07□□□□□ -1.12
PTCHD4-202ENST00000398738 INTS1Q8N201 2190 aaKnown RBP8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 PCNX2A6NKB5 2137 aa8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 YLPM1P49750 1951 aaKnown RBP8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 IGHV3-21A0A0B4J1V1 117 aa8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 MEOX1P50221 254 aa8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 SRSF2Q01130 221 aaKnown RBP8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 TMEM249Q2WGJ8 235 aa8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 PGLYRP4Q96LB8 373 aa8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 ASCL2Q99929 193 aa8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 KLF13Q9Y2Y9 288 aaPredicted RBP8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 NAV3Q8IVL0 2385 aa8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 PPOXP50336 477 aa8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 SSBP2P81877 361 aaPredicted RBP8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 SAP30LQ9HAJ7 183 aa8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 PLCE1Q9P212 2302 aa8.06□□□□□ -1.12
PTCHD4-202ENST00000398738 C9orf172C9J069 976 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 HSBP1L1C9JCN9 74 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 C15orf65H3BRN8 121 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 TOMM40O96008 361 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 SP1P08047 785 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 REG1BP48304 166 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 CT83Q5H943 113 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 DUX4L9Q6RFH8 374 aaPredicted RBP8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 MUC15Q8N387 334 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 OR4S2Q8NH73 311 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 TPPP3Q9BW30 176 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 SAA2-SAA4A0A096LPE2 208 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 SMIM27A0A1W2PRY6 76 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 C2orf70A6NJV1 201 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 C15orf61A6NNL5 157 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 LEPROTL1O95214 131 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 IGKV1-16P04430 117 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 ADH4P08319 380 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 TAS2R45P59539 299 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 TBR1Q16650 682 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 OCIAD2Q56VL3 154 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 ATP1A1-AS1Q5TC04 95 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms