RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 S100A7AQ86SG5 101 aa9.16□□□□□ -0.94
CSGALNACT1-202ENST00000397998 C9orf106Q8NAJ2 232 aa9.16□□□□□ -0.94
CSGALNACT1-202ENST00000397998 CHODLQ9H9P2 273 aa9.16□□□□□ -0.94
CSGALNACT1-202ENST00000397998 YLPM1P49750 1951 aaKnown RBP9.16□□□□□ -0.94
CSGALNACT1-202ENST00000397998 PLCE1Q9P212 2302 aa9.16□□□□□ -0.94
CSGALNACT1-202ENST00000397998 UPK2O00526 184 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 SFTPCP11686 197 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 RIGQ13278 110 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 CLEC7AQ9BXN2 247 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 GP6Q9HCN6 339 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 SELENOKQ9Y6D0 94 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 PTPRSQ13332 1948 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 ACACAQ13085 2346 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 K7EN84 100 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 SCGB2A1O75556 95 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 FRMD6-AS1P0C7T7 363 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 C10orf55Q5SWW7 151 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 TSKUQ8WUA8 353 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 ZNF714Q96N38 554 aa9.15□□□□□ -0.94
CSGALNACT1-202ENST00000397998 K7ERU9 68 aa9.15□□□□□ -0.95
CSGALNACT1-202ENST00000397998 M0QZ24 198 aa9.15□□□□□ -0.95
CSGALNACT1-202ENST00000397998 FAM87AP0C7U9 286 aa9.15□□□□□ -0.95
CSGALNACT1-202ENST00000397998 ACP1P24666 158 aa9.15□□□□□ -0.95
CSGALNACT1-202ENST00000397998 CD69Q07108 199 aa9.15□□□□□ -0.95
CSGALNACT1-202ENST00000397998 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.95
CSGALNACT1-202ENST00000397998 SRSF12Q8WXF0 261 aaKnown RBP9.15□□□□□ -0.95
CSGALNACT1-202ENST00000397998 NUDT11Q96G61 164 aa9.15□□□□□ -0.95
CSGALNACT1-202ENST00000397998 RCHY1Q96PM5 261 aa9.15□□□□□ -0.95
CSGALNACT1-202ENST00000397998 RPL27AP46776 148 aaKnown RBP9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 PPOXP50336 477 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 FBLN7Q53RD9 439 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 TMEM108Q6UXF1 575 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 TEX43Q6ZNM6 134 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 GOLT1AQ6ZVE7 132 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 SNRNP40Q96DI7 357 aaKnown RBP9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 MRPL20Q9BYC9 149 aaKnown RBP9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 AAMDCQ9H7C9 122 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 V9GYV3 84 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 FAM90A9PA6NNJ1 464 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 PMS2P5A8MQ11 134 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 SRRM5B3KS81 715 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 TSPOP30536 169 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 S100A7P31151 101 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 VDAC2P45880 294 aaPredicted RBP9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 RPL24P83731 157 aaKnown RBP9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 Q6ZVH6 145 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 NIT1Q86X76 327 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 FDCSPQ8NFU4 85 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 PRR7Q8TB68 274 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 RPEQ96AT9 228 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 CDX2Q99626 313 aaPredicted RBP9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 RASL11BQ9BPW5 248 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 MED13Q9UHV7 2174 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 GAGE10A6NGK3 116 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 CORTO00230 105 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 HLA-DRB1P01911 266 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 CCL3L1P16619 93 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 PRCDQ00LT1 54 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 MUC15Q8N387 334 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 STPG4Q8N801 248 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 RAB37Q96AX2 223 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 MCRIP2Q9BUT9 160 aaKnown RBP9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 HIF1ANQ9NWT6 349 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 HIGD1AQ9Y241 93 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 IGKV1D-17A0A075B6S4 117 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 IGLC2P0DOY2 106 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 IGLC3P0DOY3 106 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 OR4C13Q8NGP0 309 aa9.14□□□□□ -0.95
CSGALNACT1-202ENST00000397998 TMEM136Q6ZRR5 245 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 C5orf17Q8NAS9 161 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 SLC25A33Q9BSK2 321 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 ZNRD1Q9P1U0 126 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 INSIG2Q9Y5U4 225 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 LY96Q9Y6Y9 160 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 A0A1B0GWJ7 208 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 FBLL1A6NHQ2 334 aaKnown RBP9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 PRRG2O14669 202 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 NMUP48645 174 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 Q6ZR03 302 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 NUP35Q8NFH5 326 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 FOXA2Q9Y261 457 aaPredicted RBP9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 TRGV8A0A0C4DH27 118 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 FAM181BA6NEQ2 426 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 SS18L1O75177 396 aaPredicted RBP9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 DAZAP2Q15038 168 aaPredicted RBP9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 TRIP6Q15654 476 aaKnown RBP9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 ZNF841Q6ZN19 808 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 GTF2H5Q6ZYL4 71 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 ZCCHC24Q8N2G6 241 aaKnown RBP9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 C5orf30Q96GV9 206 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 GPR82Q96P67 336 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 NGBQ9NPG2 151 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 AP5S1Q9NUS5 200 aa9.13□□□□□ -0.95
CSGALNACT1-202ENST00000397998 IGHV1-18A0A0C4DH31 117 aa9.12□□□□□ -0.95
CSGALNACT1-202ENST00000397998 IGKV1-16P04430 117 aa9.12□□□□□ -0.95
CSGALNACT1-202ENST00000397998 LIPFP07098 398 aa9.12□□□□□ -0.95
CSGALNACT1-202ENST00000397998 MAJINQ3KP22 176 aa9.12□□□□□ -0.95
CSGALNACT1-202ENST00000397998 LDLRAD2Q5SZI1 272 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms