RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SNRNP40Q96DI7 357 aaKnown RBP4.54□□□□□ -1.68
PTPRD-205ENST00000397611 ZNF414Q96IQ9 312 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 AMMECR1Q9Y4X0 333 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-205ENST00000397611 PCNX2A6NKB5 2137 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 IGHV3OR15-7A0A075B7D8 119 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 TRGV8A0A0C4DH27 118 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 IGHV1-69-2A0A0G2JMI3 117 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 REG1AP05451 166 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 CCL4P13236 92 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 CKS2P33552 79 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 KIR2DL2P43627 348 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-205ENST00000397611 OR10W1Q8NGF6 305 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 RND1Q92730 232 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 NHP2Q9NX24 153 aaKnown RBP4.54□□□□□ -1.68
PTPRD-205ENST00000397611 FBXL7Q9UJT9 491 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 FREM1Q5H8C1 2179 aa4.54□□□□□ -1.68
PTPRD-205ENST00000397611 PPIAL4EA0A075B759 164 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 C12orf77C9JDV5 145 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 PPIAL4FP0DN26 164 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 C3AR1Q16581 482 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 HAPLN4Q86UW8 402 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 CXXC4Q9H2H0 198 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 MS4A5Q9H3V2 200 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 PMS2P5A8MQ11 134 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 MGPP08493 103 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 SMIM17P0DL12 118 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 SFTA2Q6UW10 78 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 MRPL16Q9NX20 251 aaKnown RBP4.53□□□□□ -1.68
PTPRD-205ENST00000397611 TNCP24821 2201 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 A0A087X0K7 114 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 TMEM238LA0A1B0GVL6 79 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 GAGE12BA1L429 117 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 A6NJY4 79 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 C22orf46C9J442 243 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 C8orf88P0DMB2 117 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 AREGP15514 252 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 CEACAM8P31997 349 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-205ENST00000397611 LINC01551Q86U37 167 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 SARAFQ96BY9 339 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 LINC00574Q9H8X3 128 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 HIGD1AQ9Y241 93 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 LOXL2Q9Y4K0 774 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 PCNX3Q9H6A9 2034 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 SRRM5B3KS81 715 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 C3orf36Q3SXR2 165 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 Q6ZT83 130 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 OR1N2Q8NGR9 330 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 EAF1Q96JC9 268 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-205ENST00000397611 PRO3102Q9H379 93 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 SOX21Q9Y651 276 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-205ENST00000397611 MUC6Q6W4X9 2439 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 ABCA4P78363 2273 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 TNRC6AQ8NDV7 1962 aaKnown RBP4.53□□□□□ -1.68
PTPRD-205ENST00000397611 C19orf67A6NJJ6 358 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 RFPL3SP0C7P2 107 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 EIF4EBP1Q13541 118 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-205ENST00000397611 ZNF788Q6ZQV5 615 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 M0R3E3 92 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 YPEL1O60688 119 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 HYPMO75409 117 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 TSPAN13O95857 204 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 PAX2Q02962 417 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 TBR1Q16650 682 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 MDS2Q8NDY4 140 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 YPEL2Q96QA6 119 aa4.53□□□□□ -1.68
PTPRD-205ENST00000397611 A0A0G2JRQ6 117 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 LYZL6O75951 148 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 CGB3P0DN86 165 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 CGB7P0DN87 165 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 REG1BP48304 166 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 Q6ZWC4 215 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 STXBP6Q8NFX7 210 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 SLC25A33Q9BSK2 321 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 UBTD1Q9HAC8 227 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 PROCRQ9UNN8 238 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 A0A0G2JLM5 398 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 KIR2DL5BA0A0G2JN68 375 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 KIR2DL5BA0A0G2JPC4 375 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 IGKV3-15P01624 115 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 IGFBP2P18065 325 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 KIR2DL5AQ8N109 375 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 TTC9CQ8N5M4 171 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 GCSAMQ8N6F7 178 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 GNB1LQ9BYB4 327 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 FGF23Q9GZV9 251 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-205ENST00000397611 BEX4Q9NWD9 120 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-205ENST00000397611 TMEM160Q9NX00 188 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 LSM4Q9Y4Z0 139 aaKnown RBP4.52□□□□□ -1.69
PTPRD-205ENST00000397611 AGFG2O95081 481 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 TIMP3P35625 211 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 DLX1P56177 255 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 SAMD5Q5TGI4 173 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 FGFBP3Q8TAT2 258 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 CACNG8Q8WXS5 425 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 APOMO95445 188 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 Q0VG73 95 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 FAM214BQ7L5A3 538 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 ST20Q9HBF5 79 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 FTH1P19P0C7X4 201 aa4.52□□□□□ -1.69
PTPRD-205ENST00000397611 GATA2P23769 480 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms