RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 SONP18583 2426 aaKnown RBP8.97□□□□□ -0.97
CCDC40-204ENST00000397545 GNG5P63218 68 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 TMEM78Q5T7P6 136 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 Q6ZRM9 215 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 TMEM70Q9BUB7 260 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 MRPL20Q9BYC9 149 aaKnown RBP8.97□□□□□ -0.97
CCDC40-204ENST00000397545 HBBP68871 147 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 NMSQ5H8A3 153 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 UNQ5815/PRO19632Q6UWF5 114 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 ZNF497Q6ZNH5 498 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 TCF24Q7RTU0 167 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 TMEM106BQ9NUM4 274 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 RALYQ9UKM9 306 aaKnown RBP8.97□□□□□ -0.97
CCDC40-204ENST00000397545 C7orf71A4D174 169 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 HIGD1CA8MV81 97 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 PEX7O00628 323 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 TBR1Q16650 682 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 TMEM256Q8N2U0 113 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 KIR3DL3Q8N743 410 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 OR10AG1Q8NH19 301 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 PRR14LQ5THK1 2151 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 KBTBD11-OT1A0A1B0GTJ5 212 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 PLP1P60201 277 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 WDR82Q6UXN9 313 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 GGNQ86UU5 652 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 OR5R1Q8NH85 324 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 MBD3L1Q8WWY6 194 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 CDC42EP3Q9UKI2 254 aa8.97□□□□□ -0.97
CCDC40-204ENST00000397545 YLPM1P49750 1951 aaKnown RBP8.96□□□□□ -0.97
CCDC40-204ENST00000397545 C9orf172C9J069 976 aa8.96□□□□□ -0.97
CCDC40-204ENST00000397545 DLX1P56177 255 aa8.96□□□□□ -0.97
CCDC40-204ENST00000397545 LOXL3P58215 753 aa8.96□□□□□ -0.97
CCDC40-204ENST00000397545 WDR83OSQ9Y284 106 aa8.96□□□□□ -0.97
CCDC40-204ENST00000397545 TRBV24-1A0A075B6N3 115 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 IGKV3D-15A0A087WSY6 115 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 TRBV9A0A0B4J1U6 114 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 IGHV3-66A0A0C4DH42 116 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 IGKV3-15P01624 115 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 FOXF2Q12947 444 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 NRN1LQ496H8 165 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 CCDC144NLQ6NUI1 221 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 LOXL4Q96JB6 756 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 C16orf92Q96LL3 132 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 WDFY4Q6ZS81 3184 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 SAA2-SAA4A0A096LPE2 208 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 J3QW42 95 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 M0R3E3 92 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 SAA2P0DJI9 122 aaPredicted RBP8.96□□□□□ -0.98
CCDC40-204ENST00000397545 CD24P25063 80 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 RELQ04864 619 aaPredicted RBP8.96□□□□□ -0.98
CCDC40-204ENST00000397545 RNFT1Q5M7Z0 435 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 C10orf55Q5SWW7 151 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 OR52E5Q8NH55 327 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 TMEM186Q96B77 213 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 C19orf24Q9BVV8 132 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 PRDM13Q9H4Q3 707 aa8.96□□□□□ -0.98
CCDC40-204ENST00000397545 CEP192Q8TEP8 1941 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 FOXI3A8MTJ6 420 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-204ENST00000397545 PF4V1P10720 104 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 MFAP4P55083 255 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 MORN2Q502X0 79 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 TEX38Q6PEX7 206 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 LINC01560Q8TB33 94 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 ZGRF1Q86YA3 2104 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 A6NNC1 897 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 IQCF6A8MYZ5 107 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 SAA1P0DJI8 122 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-204ENST00000397545 BMI1P35226 326 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 EFNB3Q15768 340 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 SPATA31B1PQ5VZV4 182 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 TMEM144Q7Z5S9 345 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 MRPL32Q9BYC8 188 aaKnown RBP8.95□□□□□ -0.98
CCDC40-204ENST00000397545 FASNP49327 2511 aaKnown RBP8.95□□□□□ -0.98
CCDC40-204ENST00000397545 IGHV3OR16-10A0A075B7F0 116 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 DUTP33316 252 aaKnown RBP8.95□□□□□ -0.98
CCDC40-204ENST00000397545 TIMP3P35625 211 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 OR10W1Q8NGF6 305 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 OR1N2Q8NGR9 330 aa8.95□□□□□ -0.98
CCDC40-204ENST00000397545 MED13Q9UHV7 2174 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 TRAV5A0A0B4J249 113 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 TRAV8-6A0A0B4J262 113 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 APOHP02749 345 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-204ENST00000397545 FABP2P12104 132 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 ANOS1P23352 680 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 TIMM23BQ5SRD1 257 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 C20orf204Q6ZNR8 217 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 OSR1Q8TAX0 266 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-204ENST00000397545 DPF1Q92782 380 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 DIRC2Q96SL1 478 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 METRNQ9UJH8 293 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 FOXA2Q9Y261 457 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-204ENST00000397545 IGHV1-69-2A0A0G2JMI3 117 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 HERVK_113P61574 105 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 RBPMS2Q6ZRY4 209 aaKnown RBP8.94□□□□□ -0.98
CCDC40-204ENST00000397545 CYYR1Q96J86 154 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 MIEN1Q9BRT3 115 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 CLEC7AQ9BXN2 247 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 LAMTOR2Q9Y2Q5 125 aa8.94□□□□□ -0.98
CCDC40-204ENST00000397545 TRAV3A0A0B4J244 114 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms