RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 GON7Q9BXV9 100 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 MFSD2BA6NFX1 497 aa16.56■□□□□ 0.24
CPNE1-204ENST00000397443 TCF21O43680 179 aa16.56■□□□□ 0.24
CPNE1-204ENST00000397443 GPX4P36969 197 aaPredicted RBP16.56■□□□□ 0.24
CPNE1-204ENST00000397443 VWC2Q2TAL6 325 aa16.56■□□□□ 0.24
CPNE1-204ENST00000397443 ACSM6Q6P461 480 aa16.56■□□□□ 0.24
CPNE1-204ENST00000397443 BTNL8Q6UX41 500 aa16.56■□□□□ 0.24
CPNE1-204ENST00000397443 NPIPB3Q92617 1050 aa16.56■□□□□ 0.24
CPNE1-204ENST00000397443 WDR61Q9GZS3 305 aaKnown RBP16.56■□□□□ 0.24
CPNE1-204ENST00000397443 NPVFQ9HCQ7 196 aa16.56■□□□□ 0.24
CPNE1-204ENST00000397443 RPS10-NUDT3A0A1W2PQS6 291 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 PF4V1P10720 104 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 ETFRF1Q6IPR1 90 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 STOML3Q8TAV4 291 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 SCARB1Q8WTV0 552 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 TMED6Q8WW62 240 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 CACNG8Q8WXS5 425 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 SLC25A32Q9H2D1 315 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 THYN1Q9P016 225 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 TRGV3P03979 118 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 ATP6V0CP27449 155 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 EIF5AP63241 154 aaKnown RBP16.55■□□□□ 0.24
CPNE1-204ENST00000397443 TEX261Q6UWH6 196 aa16.55■□□□□ 0.24
CPNE1-204ENST00000397443 TPPP2P59282 170 aa16.54■□□□□ 0.24
CPNE1-204ENST00000397443 C15orf32Q32M92 178 aa16.54■□□□□ 0.24
CPNE1-204ENST00000397443 Q8N2B8 174 aa16.54■□□□□ 0.24
CPNE1-204ENST00000397443 KLK15Q9H2R5 256 aa16.54■□□□□ 0.24
CPNE1-204ENST00000397443 SLA2Q9H6Q3 261 aa16.54■□□□□ 0.24
CPNE1-204ENST00000397443 IGKV1OR2-108A0A075B7D4 117 aa16.53■□□□□ 0.24
CPNE1-204ENST00000397443 HIST1H1BP16401 226 aaKnown RBP16.53■□□□□ 0.24
CPNE1-204ENST00000397443 FAM74A1Q5RGS3 127 aa16.53■□□□□ 0.24
CPNE1-204ENST00000397443 TEPPQ6URK8 271 aa16.53■□□□□ 0.24
CPNE1-204ENST00000397443 GINS3Q9BRX5 216 aa16.53■□□□□ 0.24
CPNE1-204ENST00000397443 SERTAD4Q9NUC0 356 aa16.53■□□□□ 0.24
CPNE1-204ENST00000397443 WDR83OSQ9Y284 106 aa16.53■□□□□ 0.24
CPNE1-204ENST00000397443 CFHR3Q02985 330 aa16.53■□□□□ 0.24
CPNE1-204ENST00000397443 ZNF680Q8NEM1 530 aa16.53■□□□□ 0.24
CPNE1-204ENST00000397443 TRBV9A0A0B4J1U6 114 aa16.52■□□□□ 0.23
CPNE1-204ENST00000397443 PSMB11A5LHX3 300 aa16.52■□□□□ 0.23
CPNE1-204ENST00000397443 TMEM144Q7Z5S9 345 aa16.52■□□□□ 0.23
CPNE1-204ENST00000397443 CENPVQ7Z7K6 275 aaPredicted RBP16.52■□□□□ 0.23
CPNE1-204ENST00000397443 MGST2Q99735 147 aa16.52■□□□□ 0.23
CPNE1-204ENST00000397443 NPCDR1Q9BY65 106 aa16.52■□□□□ 0.23
CPNE1-204ENST00000397443 ARV1Q9H2C2 271 aa16.52■□□□□ 0.23
CPNE1-204ENST00000397443 C2CD3Q4AC94 2353 aa16.52■□□□□ 0.23
CPNE1-204ENST00000397443 ZFP92A6NM28 416 aa16.51■□□□□ 0.23
CPNE1-204ENST00000397443 NECAP1Q8NC96 275 aa16.51■□□□□ 0.23
CPNE1-204ENST00000397443 MDKP21741 143 aaPredicted RBP16.51■□□□□ 0.23
CPNE1-204ENST00000397443 CAMLGP49069 296 aa16.51■□□□□ 0.23
CPNE1-204ENST00000397443 Q56UQ5 140 aa16.51■□□□□ 0.23
CPNE1-204ENST00000397443 ZNF709Q8N972 641 aa16.51■□□□□ 0.23
CPNE1-204ENST00000397443 OR2G3Q8NGZ4 309 aa16.51■□□□□ 0.23
CPNE1-204ENST00000397443 C21orf62Q9NYP8 219 aa16.51■□□□□ 0.23
CPNE1-204ENST00000397443 LSM4Q9Y4Z0 139 aaKnown RBP16.51■□□□□ 0.23
CPNE1-204ENST00000397443 FNDC10F2Z333 226 aa16.5■□□□□ 0.23
CPNE1-204ENST00000397443 AGPAT2O15120 278 aa16.5■□□□□ 0.23
CPNE1-204ENST00000397443 TSPAN9O75954 239 aa16.5■□□□□ 0.23
CPNE1-204ENST00000397443 IGLV1-40P01703 118 aa16.5■□□□□ 0.23
CPNE1-204ENST00000397443 OR10J1P30954 320 aa16.5■□□□□ 0.23
CPNE1-204ENST00000397443 SLC35B1P78383 322 aa16.5■□□□□ 0.23
CPNE1-204ENST00000397443 TMEM182Q6ZP80 229 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-204ENST00000397443 TMEM116Q8NCL8 245 aa16.5■□□□□ 0.23
CPNE1-204ENST00000397443 ZNF580Q9UK33 172 aa16.5■□□□□ 0.23
CPNE1-204ENST00000397443 IGHV3-11P01762 117 aa16.49■□□□□ 0.23
CPNE1-204ENST00000397443 SPP1P10451 314 aa16.49■□□□□ 0.23
CPNE1-204ENST00000397443 GATA2P23769 480 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-204ENST00000397443 ELLP55199 621 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-204ENST00000397443 ATP5G2Q06055 141 aa16.49■□□□□ 0.23
CPNE1-204ENST00000397443 PCNPQ8WW12 178 aaKnown RBP16.49■□□□□ 0.23
CPNE1-204ENST00000397443 GNPNAT1Q96EK6 184 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-204ENST00000397443 PARD6GQ9BYG4 376 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-204ENST00000397443 IFNA7P01567 189 aa16.49■□□□□ 0.23
CPNE1-204ENST00000397443 IGHG4P01861 327 aa16.49■□□□□ 0.23
CPNE1-204ENST00000397443 RAB9AP51151 201 aa16.49■□□□□ 0.23
CPNE1-204ENST00000397443 MFAP4P55083 255 aa16.49■□□□□ 0.23
CPNE1-204ENST00000397443 ZNF90Q03938 601 aa16.49■□□□□ 0.23
CPNE1-204ENST00000397443 MIC13Q5XKP0 118 aa16.49■□□□□ 0.23
CPNE1-204ENST00000397443 OR4X1Q8NH49 305 aa16.49■□□□□ 0.23
CPNE1-204ENST00000397443 OR2T8A6NH00 312 aa16.48■□□□□ 0.23
CPNE1-204ENST00000397443 GNG7O60262 68 aa16.48■□□□□ 0.23
CPNE1-204ENST00000397443 RPL15P61313 204 aaKnown RBP16.48■□□□□ 0.23
CPNE1-204ENST00000397443 RAB31Q13636 194 aa16.48■□□□□ 0.23
CPNE1-204ENST00000397443 GGTLC1Q9BX51 225 aa16.48■□□□□ 0.23
CPNE1-204ENST00000397443 PLA2G2EQ9NZK7 142 aa16.48■□□□□ 0.23
CPNE1-204ENST00000397443 IGKV1D-37A0A075B6S9 117 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 H3BUA1 57 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 MPDU1O75352 247 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 PSMB8P28062 276 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 HIST2H2BDQ6DRA6 164 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 TEX38Q6PEX7 206 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 UBQLN2Q9UHD9 624 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 FAM223BA6NKX1 122 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 C17orf112F2Z3M2 114 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 CLN5O75503 358 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 RPLP1P05386 114 aaKnown RBP16.47■□□□□ 0.23
CPNE1-204ENST00000397443 SEC11BP0C7V7 166 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 GPR183P32249 361 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 NPBWR1P48145 328 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 TIGITQ495A1 244 aa16.47■□□□□ 0.23
CPNE1-204ENST00000397443 EIF5AL1Q6IS14 154 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms