RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ATP6V0BQ99437 205 aa18.41■□□□□ 0.54
TSPAN4-202ENST00000397396 PARD6GQ9BYG4 376 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-202ENST00000397396 K7EIM0 57 aa18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 PSMB8P28062 276 aa18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 TPPP2P59282 170 aa18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 AKR1C1Q04828 323 aa18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 OPCMLQ14982 345 aa18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 OR4X2Q8NGF9 303 aa18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 LINC01006Q8NI28 216 aa18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 BSCL2Q96G97 398 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 MS4A10Q96PG2 267 aa18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 FNDC4Q9H6D8 234 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 GAR1Q9NY12 217 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-202ENST00000397396 MPDU1O75352 247 aa18.39■□□□□ 0.53
TSPAN4-202ENST00000397396 NPBWR1P48145 328 aa18.39■□□□□ 0.53
TSPAN4-202ENST00000397396 ATP5G2Q06055 141 aa18.39■□□□□ 0.53
TSPAN4-202ENST00000397396 ZNF329Q86UD4 541 aa18.39■□□□□ 0.53
TSPAN4-202ENST00000397396 SLC51BQ86UW2 128 aa18.39■□□□□ 0.53
TSPAN4-202ENST00000397396 TMEM116Q8NCL8 245 aa18.39■□□□□ 0.53
TSPAN4-202ENST00000397396 EEF1AKMT3Q96AZ1 226 aa18.39■□□□□ 0.53
TSPAN4-202ENST00000397396 TXN2Q99757 166 aa18.39■□□□□ 0.53
TSPAN4-202ENST00000397396 ZNF471Q9BX82 626 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-202ENST00000397396 CLPSL1A2RUU4 121 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 NDUFB8O95169 186 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 FCGR2BP31994 310 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 RAB9AP51151 201 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 MFAP4P55083 255 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 GAMTQ14353 236 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 C15orf32Q32M92 178 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 ACSM6Q6P461 480 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 TMEM144Q7Z5S9 345 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 KLHDC1Q8N7A1 406 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 RNF152Q8N8N0 203 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 UBAC2Q8NBM4 344 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 OR4X1Q8NH49 305 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 SCGB1C1Q8TD33 95 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 SCARB1Q8WTV0 552 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 C21orf62Q9NYP8 219 aa18.38■□□□□ 0.53
TSPAN4-202ENST00000397396 TRBV7-1A0A0A6YYK4 115 aa18.37■□□□□ 0.53
TSPAN4-202ENST00000397396 UBE2L5PA0A1B0GUS4 154 aa18.37■□□□□ 0.53
TSPAN4-202ENST00000397396 RAB31Q13636 194 aa18.37■□□□□ 0.53
TSPAN4-202ENST00000397396 TEPPQ6URK8 271 aa18.37■□□□□ 0.53
TSPAN4-202ENST00000397396 ACY3Q96HD9 319 aa18.37■□□□□ 0.53
TSPAN4-202ENST00000397396 TPT1P13693 172 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-202ENST00000397396 RND2P52198 227 aa18.36■□□□□ 0.53
TSPAN4-202ENST00000397396 WDR61Q9GZS3 305 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-202ENST00000397396 WFDC1Q9HC57 220 aa18.36■□□□□ 0.53
TSPAN4-202ENST00000397396 CYTL1Q9NRR1 136 aa18.36■□□□□ 0.53
TSPAN4-202ENST00000397396 KCNIP2Q9NS61 270 aa18.36■□□□□ 0.53
TSPAN4-202ENST00000397396 WDR83OSQ9Y284 106 aa18.36■□□□□ 0.53
TSPAN4-202ENST00000397396 RNF114Q9Y508 228 aa18.36■□□□□ 0.53
TSPAN4-202ENST00000397396 TRAV30A0A087WSZ9 112 aa18.35■□□□□ 0.53
TSPAN4-202ENST00000397396 RPL7L1Q6DKI1 246 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-202ENST00000397396 TREML4Q6UXN2 200 aa18.35■□□□□ 0.53
TSPAN4-202ENST00000397396 OR5AU1Q8NGC0 362 aa18.35■□□□□ 0.53
TSPAN4-202ENST00000397396 STOML3Q8TAV4 291 aa18.35■□□□□ 0.53
TSPAN4-202ENST00000397396 MFSD2BA6NFX1 497 aa18.34■□□□□ 0.53
TSPAN4-202ENST00000397396 C17orf112F2Z3M2 114 aa18.34■□□□□ 0.53
TSPAN4-202ENST00000397396 CLN5O75503 358 aa18.34■□□□□ 0.53
TSPAN4-202ENST00000397396 FOXL1Q12952 345 aa18.34■□□□□ 0.53
TSPAN4-202ENST00000397396 THAP8Q8NA92 274 aa18.34■□□□□ 0.53
TSPAN4-202ENST00000397396 ZNF502Q8TBZ5 544 aa18.34■□□□□ 0.53
TSPAN4-202ENST00000397396 NPIPB3Q92617 1050 aa18.34■□□□□ 0.53
TSPAN4-202ENST00000397396 GNPNAT1Q96EK6 184 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-202ENST00000397396 IGHV3-21A0A0B4J1V1 117 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 GNG7O60262 68 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 FABP1P07148 127 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 FGF7P21781 194 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 MLANAQ16655 118 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 Q56UQ5 140 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 BTNL8Q6UX41 500 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 ZNF709Q8N972 641 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 MYOZ3Q8TDC0 251 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 WFDC12Q8WWY7 111 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 TAF15Q92804 592 aaKnown RBP eCLIP18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 KLK15Q9H2R5 256 aa18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 LSM4Q9Y4Z0 139 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-202ENST00000397396 NIPBLQ6KC79 2804 aaeCLIP18.33■□□□□ 0.52
TSPAN4-202ENST00000397396 MDKP21741 143 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-202ENST00000397396 EIF5AL1Q6IS14 154 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-202ENST00000397396 BAP18Q8IXM2 172 aa18.32■□□□□ 0.52
TSPAN4-202ENST00000397396 WIPF2Q8TF74 440 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-202ENST00000397396 BOLA1Q9Y3E2 137 aa18.32■□□□□ 0.52
TSPAN4-202ENST00000397396 ZFP92A6NM28 416 aa18.31■□□□□ 0.52
TSPAN4-202ENST00000397396 PROK1P58294 105 aa18.31■□□□□ 0.52
TSPAN4-202ENST00000397396 UBE2E2Q96LR5 201 aa18.31■□□□□ 0.52
TSPAN4-202ENST00000397396 TRGV9Q99603 122 aa18.31■□□□□ 0.52
TSPAN4-202ENST00000397396 ARV1Q9H2C2 271 aa18.31■□□□□ 0.52
TSPAN4-202ENST00000397396 TIMM9Q9Y5J7 89 aa18.31■□□□□ 0.52
TSPAN4-202ENST00000397396 IGHV3-48P01763 117 aa18.3■□□□□ 0.52
TSPAN4-202ENST00000397396 OR10J1P30954 320 aa18.3■□□□□ 0.52
TSPAN4-202ENST00000397396 SELENOTP62341 195 aa18.3■□□□□ 0.52
TSPAN4-202ENST00000397396 DEFA5Q01523 94 aa18.3■□□□□ 0.52
TSPAN4-202ENST00000397396 SPSB3Q6PJ21 355 aa18.3■□□□□ 0.52
TSPAN4-202ENST00000397396 C10orf99Q6UWK7 81 aa18.3■□□□□ 0.52
TSPAN4-202ENST00000397396 ZNF491Q8N8L2 437 aa18.3■□□□□ 0.52
TSPAN4-202ENST00000397396 ST8SIA2Q92186 375 aa18.3■□□□□ 0.52
TSPAN4-202ENST00000397396 GINS3Q9BRX5 216 aa18.3■□□□□ 0.52
TSPAN4-202ENST00000397396 NPCDR1Q9BY65 106 aa18.3■□□□□ 0.52
TSPAN4-202ENST00000397396 NUPL2O15504 423 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms