RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LINC01548A6NM66 108 aa10.38□□□□□ -0.75
SEC13-209ENST00000397117 CORTO00230 105 aa10.38□□□□□ -0.75
SEC13-209ENST00000397117 IGHG2P01859 326 aa10.38□□□□□ -0.75
SEC13-209ENST00000397117 CTRB1P17538 263 aa10.38□□□□□ -0.75
SEC13-209ENST00000397117 BEAN1Q3B7T3 259 aa10.38□□□□□ -0.75
SEC13-209ENST00000397117 ASPHD1Q5U4P2 390 aa10.38□□□□□ -0.75
SEC13-209ENST00000397117 CTRB2Q6GPI1 263 aa10.38□□□□□ -0.75
SEC13-209ENST00000397117 TTC9CQ8N5M4 171 aa10.38□□□□□ -0.75
SEC13-209ENST00000397117 MISP3Q96FF7 219 aa10.38□□□□□ -0.75
SEC13-209ENST00000397117 UQCC1Q9NVA1 299 aa10.38□□□□□ -0.75
SEC13-209ENST00000397117 FBXO24O75426 580 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 TSPAN9O75954 239 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 CRYGCP07315 174 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 OPRK1P41145 380 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 DLK1P80370 383 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 AKIRIN2Q53H80 203 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 ARSJQ5FYB0 599 aaPredicted RBP10.37□□□□□ -0.75
SEC13-209ENST00000397117 C19orf35Q6ZS72 473 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 UBAC2Q8NBM4 344 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 OR5T1Q8NG75 326 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 SCGB1C1Q8TD33 95 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 PRSS22Q9GZN4 317 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 UBQLN2Q9UHD9 624 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 NOTCH3Q9UM47 2321 aa10.37□□□□□ -0.75
SEC13-209ENST00000397117 TRAV41A0A0B4J266 112 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 UBE2L5PA0A1B0GUS4 154 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 PRSS46E5RG02 174 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 AP4M1O00189 453 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 GPX4P36969 197 aaPredicted RBP10.36□□□□□ -0.75
SEC13-209ENST00000397117 KPRPQ5T749 579 aaPredicted RBP10.36□□□□□ -0.75
SEC13-209ENST00000397117 ETFRF1Q6IPR1 90 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 BAP18Q8IXM2 172 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 SCARB1Q8WTV0 552 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 PHYHIPLQ96FC7 376 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 G3V318 75 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 G3V4G9 280 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 IGF1P05019 195 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 MFAP2P55001 183 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 CD69Q07108 199 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 ALKAL2Q6UX46 152 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 HSD17B11Q8NBQ5 300 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 CACNG8Q8WXS5 425 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 SLC35E1Q96K37 410 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 ZNF355PQ9NSJ1 428 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 THYN1Q9P016 225 aa10.36□□□□□ -0.75
SEC13-209ENST00000397117 FNDC10F2Z333 226 aa10.35□□□□□ -0.75
SEC13-209ENST00000397117 PRH1P02810 166 aa10.35□□□□□ -0.75
SEC13-209ENST00000397117 CRIP2P52943 208 aaPredicted RBP10.35□□□□□ -0.75
SEC13-209ENST00000397117 AKR1C1Q04828 323 aa10.35□□□□□ -0.75
SEC13-209ENST00000397117 VWC2Q2TAL6 325 aa10.35□□□□□ -0.75
SEC13-209ENST00000397117 PVRIGQ6DKI7 326 aa10.35□□□□□ -0.75
SEC13-209ENST00000397117 EIF5AL1Q6IS14 154 aaKnown RBP10.35□□□□□ -0.75
SEC13-209ENST00000397117 Q6ZS46 218 aa10.35□□□□□ -0.75
SEC13-209ENST00000397117 SLC16A13Q7RTY0 426 aa10.35□□□□□ -0.75
SEC13-209ENST00000397117 NPVFQ9HCQ7 196 aa10.35□□□□□ -0.75
SEC13-209ENST00000397117 LINC00527Q9UJ94 153 aa10.35□□□□□ -0.75
SEC13-209ENST00000397117 HIST1H1BP16401 226 aaKnown RBP10.34□□□□□ -0.75
SEC13-209ENST00000397117 FGF7P21781 194 aa10.34□□□□□ -0.75
SEC13-209ENST00000397117 RAB14P61106 215 aa10.34□□□□□ -0.75
SEC13-209ENST00000397117 SAMD5Q5TGI4 173 aa10.34□□□□□ -0.75
SEC13-209ENST00000397117 GNPNAT1Q96EK6 184 aaPredicted RBP10.34□□□□□ -0.75
SEC13-209ENST00000397117 NOL4LQ96MY1 436 aaPredicted RBP10.34□□□□□ -0.75
SEC13-209ENST00000397117 GINS3Q9BRX5 216 aa10.34□□□□□ -0.75
SEC13-209ENST00000397117 PARD6GQ9BYG4 376 aaPredicted RBP10.34□□□□□ -0.75
SEC13-209ENST00000397117 ARV1Q9H2C2 271 aa10.34□□□□□ -0.75
SEC13-209ENST00000397117 DMRT1Q9Y5R6 373 aa10.34□□□□□ -0.75
SEC13-209ENST00000397117 IGLV11-55A0A075B6I3 123 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 MT-CO2P00403 227 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 RAB31Q13636 194 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 GAMTQ14353 236 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 MLANAQ16655 118 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 ZNF709Q8N972 641 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 ACY3Q96HD9 319 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 CITED4Q96RK1 184 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 WDR61Q9GZS3 305 aaKnown RBP10.33□□□□□ -0.76
SEC13-209ENST00000397117 MED9Q9NWA0 146 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 IGHV3-21A0A0B4J1V1 117 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 MPDU1O75352 247 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 PRB2P02812 416 aaPredicted RBP10.33□□□□□ -0.76
SEC13-209ENST00000397117 TEPPQ6URK8 271 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 BTNL8Q6UX41 500 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 OR2T6Q8NHC8 308 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 FANCD2OSQ96PS1 177 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 SLC25A32Q9H2D1 315 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 FNDC4Q9H6D8 234 aaPredicted RBP10.33□□□□□ -0.76
SEC13-209ENST00000397117 ZNF702PQ9H963 129 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 ZNF580Q9UK33 172 aa10.33□□□□□ -0.76
SEC13-209ENST00000397117 C17orf112F2Z3M2 114 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 I3L2K1 104 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 OR2J3O76001 311 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 IGHV3-48P01763 117 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 ATP6V0CP27449 155 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 RUNX1Q01196 453 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 TMEM95Q3KNT9 176 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 C19orf54Q5BKX5 351 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 TMED6Q8WW62 240 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 FBXL7Q9UJT9 491 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 WDR83OSQ9Y284 106 aa10.32□□□□□ -0.76
SEC13-209ENST00000397117 DNAH3Q8TD57 4116 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms