RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 GAFA1Q96PS6 74 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 SERTAD4Q9NUC0 356 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 ZNF586Q9NXT0 402 aa11.28□□□□□ -0.6
NUP98-204ENST00000397004 ZNF318Q5VUA4 2279 aa11.27□□□□□ -0.6
NUP98-204ENST00000397004 SH2D7A6NKC9 451 aaPredicted RBP11.27□□□□□ -0.6
NUP98-204ENST00000397004 HOXC12P31275 282 aa11.27□□□□□ -0.6
NUP98-204ENST00000397004 KIR2DS2P43631 304 aa11.27□□□□□ -0.6
NUP98-204ENST00000397004 RPL8P62917 257 aaKnown RBP11.27□□□□□ -0.6
NUP98-204ENST00000397004 NUP35Q8NFH5 326 aa11.27□□□□□ -0.6
NUP98-204ENST00000397004 SLC35E1Q96K37 410 aa11.27□□□□□ -0.6
NUP98-204ENST00000397004 CCL13Q99616 98 aa11.27□□□□□ -0.6
NUP98-204ENST00000397004 TMEM167BQ9NRX6 74 aa11.27□□□□□ -0.6
NUP98-204ENST00000397004 FNDC10F2Z333 226 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 ITGB1BP1O14713 200 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 MT-CO2P00403 227 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 GNG5P63218 68 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 TIGITQ495A1 244 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 C11orf42Q8N5U0 333 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 FAM222BQ8WU58 562 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 PLEKHA3Q9HB20 300 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 ZFP30Q9Y2G7 519 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 CCL25O15444 150 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 NTF3P20783 257 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 STUMQ69YW2 141 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.61
NUP98-204ENST00000397004 DNAJC4Q9NNZ3 241 aa11.27□□□□□ -0.61
NUP98-204ENST00000397004 LRBAP50851 2863 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 M0QZ24 198 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 APCSP02743 223 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 CD69Q07108 199 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 RAB31Q13636 194 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 C2orf83Q53S99 150 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 ZNF257Q9Y2Q1 563 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 ABCA1O95477 2261 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 A0A1W2PRE2 83 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 IZUMO1RA6ND01 250 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 PLAUP00749 431 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 MT-ND6P03923 174 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 C8orf88P0DMB2 117 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 RELQ04864 619 aaPredicted RBP11.26□□□□□ -0.61
NUP98-204ENST00000397004 WT1-ASQ06250 92 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 C19orf35Q6ZS72 473 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 PIP4P1Q86T03 277 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 NUDT10Q8NFP7 164 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 NUDT11Q96G61 164 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 DYSFO75923 2080 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 C2orf70A6NJV1 201 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 SIAH2O43255 324 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 FAM120AOSQ5T036 256 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 SLC25A48Q6ZT89 311 aaKnown RBP11.26□□□□□ -0.61
NUP98-204ENST00000397004 ZNF329Q86UD4 541 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 OR4F17Q8NGA8 305 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 RITA1Q96K30 269 aa11.26□□□□□ -0.61
NUP98-204ENST00000397004 LINC00614P0C842 121 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 USF1P22415 310 aaPredicted RBP11.25□□□□□ -0.61
NUP98-204ENST00000397004 PMCHL1Q16048 86 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 WDR73Q6P4I2 378 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 BHLHA15Q7RTS1 189 aaPredicted RBP11.25□□□□□ -0.61
NUP98-204ENST00000397004 ENY2Q9NPA8 101 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 NDUFA4L2Q9NRX3 87 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 LAMTOR2Q9Y2Q5 125 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 PRR33A8MZF0 331 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 REG1BP48304 166 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 C21orf62-AS1Q17RA5 79 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 COL5A1-AS1Q5SY13 56 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 Q6ZN92 141 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 LINC00173Q6ZV60 143 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 TCF21O43680 179 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 MRGPRG-AS1Q2M3A8 158 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 MRPL20Q9BYC9 149 aaKnown RBP11.25□□□□□ -0.61
NUP98-204ENST00000397004 PRNDQ9UKY0 176 aa11.25□□□□□ -0.61
NUP98-204ENST00000397004 M0R1B8 84 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 HLA-DQA1P01909 254 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 UNQ5815/PRO19632Q6UWF5 114 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 ZCCHC24Q8N2G6 241 aaKnown RBP11.24□□□□□ -0.61
NUP98-204ENST00000397004 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.24□□□□□ -0.61
NUP98-204ENST00000397004 LINC00574Q9H8X3 128 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 TNFRSF19Q9NS68 423 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 MYCNOSP40205 109 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 MFAP2P55001 183 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 FXYD5Q96DB9 178 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 ALKBH7Q9BT30 221 aaPredicted RBP11.24□□□□□ -0.61
NUP98-204ENST00000397004 SLC35D1Q9NTN3 355 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 IGLL1P15814 213 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 TSPOP30536 169 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 UBE2L3P68036 154 aaKnown RBP11.24□□□□□ -0.61
NUP98-204ENST00000397004 TPSG1Q9NRR2 321 aa11.24□□□□□ -0.61
NUP98-204ENST00000397004 RPUSD1Q9UJJ7 312 aaKnown RBP11.24□□□□□ -0.61
NUP98-204ENST00000397004 AMMECR1Q9Y4X0 333 aaPredicted RBP11.24□□□□□ -0.61
NUP98-204ENST00000397004 OVOL3O00110 214 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 REG1AP05451 166 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 SELENOVP59797 346 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 CLEC5AQ9NY25 188 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 UQCR10Q9UDW1 63 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 IGLV3-9A0A075B6K5 115 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 HINT1P49773 126 aaPredicted RBP11.23□□□□□ -0.61
NUP98-204ENST00000397004 OR1L8Q8NGR8 309 aa11.23□□□□□ -0.61
NUP98-204ENST00000397004 WIPF2Q8TF74 440 aaPredicted RBP11.23□□□□□ -0.61
NUP98-204ENST00000397004 TUBG2Q9NRH3 451 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms