RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 ZFP36P26651 326 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-203ENST00000395881 CD81P60033 236 aa11.53□□□□□ -0.56
RTFDC1-203ENST00000395881 LMO4P61968 165 aa11.53□□□□□ -0.56
RTFDC1-203ENST00000395881 TPSG1Q9NRR2 321 aa11.53□□□□□ -0.56
RTFDC1-203ENST00000395881 METTL1Q9UBP6 276 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-203ENST00000395881 TBL2Q9Y4P3 447 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-203ENST00000395881 PUS1Q9Y606 427 aaKnown RBP eCLIP11.53□□□□□ -0.56
RTFDC1-203ENST00000395881 ANK3Q12955 4377 aaKnown RBP11.52□□□□□ -0.56
RTFDC1-203ENST00000395881 SONP18583 2426 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 NDUFS8O00217 210 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 FOXH1O75593 365 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 NDUFA3O95167 84 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 MT-CO2P00403 227 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 MOSP00540 346 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 SNRNP70P08621 437 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 C10orf55Q5SWW7 151 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 VMO1Q7Z5L0 202 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 OR1P1Q8NH06 330 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 SSMEM1Q8WWF3 244 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 ARL2-SNX15V9GYD0 113 aa11.52□□□□□ -0.57
RTFDC1-203ENST00000395881 HIVEP2P31629 2446 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 IGKV1OR2-108A0A075B7D4 117 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 CRYGCP07315 174 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 FBP1P09467 338 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 SELENOTP62341 195 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 LOXL1Q08397 574 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 EBI3Q14213 229 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 TNXAQ16473 311 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 THAP8Q8NA92 274 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 RNF2Q99496 336 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 PIMREGQ9BSJ6 248 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 BPESC1Q9GZL8 116 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 ABCA2Q9BZC7 2435 aa11.51□□□□□ -0.57
RTFDC1-203ENST00000395881 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 NBR2O15453 112 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 PDE6DO43924 150 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 HOXB4P17483 251 aaPredicted RBP11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 CNTFRP26992 372 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 OR2T10Q8NGZ9 312 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 C17orf50Q8WW18 174 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 TMPRSS5Q9H3S3 457 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 PRELID1Q9Y255 219 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 IGHV4-61A0A0C4DH41 118 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 COLCA2A8K830 154 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 TEX22C9J3V5 150 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 CLN5O75503 358 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 OR10J1P30954 320 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 UBE2E1P51965 193 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 PRB3Q04118 309 aaPredicted RBP11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 CYP2G1PQ6ZSU1 146 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 OR1L6Q8NGR2 347 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 ABHD5Q8WTS1 349 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 GATAD1Q8WUU5 269 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 MRPL32Q9BYC8 188 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 TMEM242Q9NWH2 141 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 FUT9Q9Y231 359 aa11.5□□□□□ -0.57
RTFDC1-203ENST00000395881 F6UZH7 168 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 PAGE4O60829 102 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 MT-ND4LP03901 98 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 OR5G3P0C626 314 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 FOLR2P14207 255 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 ATF4P18848 351 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 CEBPGP53567 150 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 LGALS4P56470 323 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 KLRD1Q13241 179 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 RNF212Q495C1 297 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 SRSF12Q8WXF0 261 aaKnown RBP11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 C22orf15Q8WYQ4 148 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 MALSU1Q96EH3 234 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 EAF1Q96JC9 268 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 FBXL15Q9H469 300 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 FNDC4Q9H6D8 234 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 SDF2L1Q9HCN8 221 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 F11RQ9Y624 299 aaKnown RBP11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 ARHGAP32A7KAX9 2087 aa11.49□□□□□ -0.57
RTFDC1-203ENST00000395881 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.572e-6■■■■■ 31.6
RTFDC1-203ENST00000395881 LOC105371267A0A1B0GV96 52 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 TCRBV4S1A1TA0A5B7 111 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 ZNF727A8MUV8 499 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 TOX4O94842 621 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 ARL14EPLP0DKL9 152 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 GCHFRP30047 84 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 TAS2R45P59539 299 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 LCN2P80188 198 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 SSBP2P81877 361 aaPredicted RBP11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 MMDQ15546 238 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 PQLC2Q6ZP29 291 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 LHFPL4Q7Z7J7 247 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 Q8N6K4 173 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 TMEM116Q8NCL8 245 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 OR4F5Q8NH21 305 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 OR4F4Q96R69 305 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 LPAR2Q9HBW0 351 aa11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 SEPSECSQ9HD40 501 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 TECRQ9NZ01 308 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-203ENST00000395881 NAT8Q9UHE5 227 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms