RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 RNF183Q96D59 192 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 GALNT14Q96FL9 552 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 RTBDNQ9BSG5 229 aaPredicted RBP9.99□□□□□ -0.81
SCAF11-203ENST00000395453 TMEM222Q9H0R3 208 aa9.99□□□□□ -0.81
SCAF11-203ENST00000395453 HECTD4Q9Y4D8 3996 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 CXorf65A6NEN9 183 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 NUPR2A6NF83 97 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 CTDSPLO15194 276 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 RGS5O15539 181 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 CD5P06127 495 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 BMI1P35226 326 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 SUB1P53999 127 aaKnown RBP eCLIP9.98□□□□□ -0.81
SCAF11-203ENST00000395453 CMC4P56277 68 aaPredicted RBP9.98□□□□□ -0.81
SCAF11-203ENST00000395453 MEF2DQ14814 521 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 TRIM16LQ309B1 348 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 BSXQ3C1V8 233 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 SCGB2B2Q4G0G5 96 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 RPP25LQ8N5L8 163 aaKnown RBP9.98□□□□□ -0.81
SCAF11-203ENST00000395453 STPG3Q8N7X2 389 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 SMIM4Q8WVI0 70 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 RRNAD1Q96FB5 475 aaKnown RBP9.98□□□□□ -0.81
SCAF11-203ENST00000395453 VSIRQ9H7M9 311 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 MAP6D1Q9H9H5 199 aa9.98□□□□□ -0.81
SCAF11-203ENST00000395453 IGHV3-49A0A0A0MS15 119 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 CORTO00230 105 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 ATF4P18848 351 aaPredicted RBP9.97□□□□□ -0.81
SCAF11-203ENST00000395453 RPL5P46777 297 aaKnown RBP9.97□□□□□ -0.81
SCAF11-203ENST00000395453 SURF2Q15527 256 aaPredicted RBP9.97□□□□□ -0.81
SCAF11-203ENST00000395453 DEFB135Q30KP9 77 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 ZNF600Q6ZNG1 722 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 APRG1Q8IVJ8 170 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 FAM219AQ8IW50 185 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 LILRB2Q8N423 598 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 OR52E5Q8NH55 327 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 LHFPL5Q8TAF8 219 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 DYNC2LI1Q8TCX1 351 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 GINS3Q9BRX5 216 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 FNDC4Q9H6D8 234 aaPredicted RBP9.97□□□□□ -0.81
SCAF11-203ENST00000395453 RABL2AQ9UBK7 228 aaPredicted RBP9.97□□□□□ -0.81
SCAF11-203ENST00000395453 RABL2BQ9UNT1 228 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 GPR132Q9UNW8 380 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 DNAH10Q8IVF4 4471 aa9.97□□□□□ -0.81
SCAF11-203ENST00000395453 KIAA1109Q2LD37 5005 aa9.96□□□□□ -0.81
SCAF11-203ENST00000395453 IGHV3OR16-13A0A075B7E8 117 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 IGHV3-74A0A0B4J1X5 117 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 A0A0J9YWU9 116 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 TEX13DA0A0J9YY54 714 aaPredicted RBP9.96□□□□□ -0.82
SCAF11-203ENST00000395453 A0A1B0GU03 582 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 APOHP02749 345 aaPredicted RBP9.96□□□□□ -0.82
SCAF11-203ENST00000395453 OR5AC1P0C628 307 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 RPL35AP18077 110 aaKnown RBP9.96□□□□□ -0.82
SCAF11-203ENST00000395453 SPCS3P61009 180 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 EWSR1Q01844 656 aaKnown RBP eCLIP9.96□□□□□ -0.82
SCAF11-203ENST00000395453 PMS2P11Q13670 270 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 MLANAQ16655 118 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 FAAP20Q6NZ36 180 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 LYG2Q86SG7 212 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 OR4X1Q8NH49 305 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 ST8SIA2Q92186 375 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 BCL7BQ9BQE9 202 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 PDCD10Q9BUL8 212 aa9.96□□□□□ -0.82
SCAF11-203ENST00000395453 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.96□□□□□ -0.82
SCAF11-203ENST00000395453 MRPL36Q9P0J6 103 aaKnown RBP9.96□□□□□ -0.82
SCAF11-203ENST00000395453 PUS1Q9Y606 427 aaKnown RBP eCLIP9.96□□□□□ -0.82
SCAF11-203ENST00000395453 DISC1C4P0D8 188 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 CLN5O75503 358 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 AKAIN1P0CW23 69 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 HOXA1P49639 335 aaPredicted RBP9.95□□□□□ -0.82
SCAF11-203ENST00000395453 TMBIM6P55061 237 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 PAFAH1B2P68402 229 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 DHODHQ02127 395 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 ZNF124Q15973 351 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 TCF24Q7RTU0 167 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 CLVS1Q8IUQ0 354 aaPredicted RBP9.95□□□□□ -0.82
SCAF11-203ENST00000395453 SELENOHQ8IZQ5 122 aaKnown RBP9.95□□□□□ -0.82
SCAF11-203ENST00000395453 OR4C16Q8NGL9 310 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 RAB2BQ8WUD1 216 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 RBPMSQ93062 196 aaKnown RBP9.95□□□□□ -0.82
SCAF11-203ENST00000395453 DIRAS2Q96HU8 199 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 NAA60Q9H7X0 242 aa9.95□□□□□ -0.82
SCAF11-203ENST00000395453 CCDC59Q9P031 241 aaKnown RBP9.95□□□□□ -0.82
SCAF11-203ENST00000395453 C14orf166Q9Y224 244 aaKnown RBP9.95□□□□□ -0.82
SCAF11-203ENST00000395453 IGKV3-7A0A075B6H7 116 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 TRAV2A0A0B4J234 112 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 CRYM-AS1A6NIL9 109 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 GSTZ1O43708 216 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-203ENST00000395453 DFFBO76075 338 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 TFPI2P48307 235 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 CEMP1Q6PRD7 247 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-203ENST00000395453 GBGT1Q8N5D6 347 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 GPR146Q96CH1 333 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 SOSTQ9BQB4 213 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 KRTAP9-2Q9BYQ4 174 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 C6orf62Q9GZU0 229 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-203ENST00000395453 CSTL1Q9H114 145 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 MS4A6AQ9H2W1 248 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 ENY2Q9NPA8 101 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 KLK5Q9Y337 293 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-203ENST00000395453 TMEM56-RWDD3S4R434 201 aa9.94□□□□□ -0.82
SCAF11-203ENST00000395453 ANKRD20A5PA0PJZ0 165 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms