RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 TSPAN4O14817 238 aa10.48□□□□□ -0.73
HLA-DMA-203ENST00000395305 ZNF207O43670 478 aaKnown RBP10.48□□□□□ -0.73
HLA-DMA-203ENST00000395305 YIF1AO95070 293 aa10.48□□□□□ -0.73
HLA-DMA-203ENST00000395305 SRPXP78539 464 aa10.48□□□□□ -0.73
HLA-DMA-203ENST00000395305 MLANAQ16655 118 aa10.48□□□□□ -0.73
HLA-DMA-203ENST00000395305 NMSQ5H8A3 153 aa10.48□□□□□ -0.73
HLA-DMA-203ENST00000395305 LYZL2Q7Z4W2 148 aa10.48□□□□□ -0.73
HLA-DMA-203ENST00000395305 SRRQ9GZT4 340 aa10.48□□□□□ -0.73
HLA-DMA-203ENST00000395305 PRR13Q9NZ81 148 aa10.48□□□□□ -0.73
HLA-DMA-203ENST00000395305 IGHV3OR16-8A0A075B7F1 116 aa10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 TRAV14DV4A0A0A6YYC5 116 aa10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 RBMY1BA6NDE4 496 aaKnown RBP10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 RBMY1EA6NEQ0 496 aaKnown RBP10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 CEBPZOSA8MTT3 80 aa10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 RBMY1DP0C7P1 496 aaKnown RBP10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 CCR6P51684 374 aa10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 SMCO1Q147U7 214 aa10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 C2orf83Q53S99 150 aa10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 TMED4Q7Z7H5 227 aa10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 OR4X1Q8NH49 305 aa10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 SPAG8Q99932 426 aaPredicted RBP10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 SPATA25Q9BR10 227 aa10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 FNDC4Q9H6D8 234 aaPredicted RBP10.47□□□□□ -0.73
HLA-DMA-203ENST00000395305 IGHV7-4-1A0A0J9YVY3 117 aa10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 A0A1B0GU03 582 aa10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 CHEK1O14757 476 aa10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 TOMM20LQ6UXN7 152 aa10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 ZNF600Q6ZNG1 722 aa10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 NOXA1Q86UR1 476 aa10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 TMEM116Q8NCL8 245 aa10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 RNASEH2CQ8TDP1 164 aaKnown RBP10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 RHPN1-AS1Q9BWJ2 59 aa10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 HIPK2Q9H2X6 1198 aa10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 SRD5A3Q9H8P0 318 aa10.46□□□□□ -0.73
HLA-DMA-203ENST00000395305 TRAV30A0A087WSZ9 112 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 DUXBA0A1W2PPF3 345 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 RPS10-NUDT3A0A1W2PQS6 291 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 NAP1L6A6NFF2 107 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 CLN5O75503 358 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 OPRK1P41145 380 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 TNFRSF9Q07011 255 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 BAK1Q16611 211 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 LRTM2Q8N967 370 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 CITED4Q96RK1 184 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 GINS3Q9BRX5 216 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 MRPL36Q9P0J6 103 aaKnown RBP10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 HSPB7Q9UBY9 170 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 U3KQ87 197 aa10.45□□□□□ -0.74
HLA-DMA-203ENST00000395305 C3orf84H3BNL1 204 aa10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 SCGB2A1O75556 95 aa10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 CD5P06127 495 aa10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 SLC25A4P12235 298 aa10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 SLC25A6P12236 298 aa10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 INPP1P49441 399 aa10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 ATP5IP56385 69 aaPredicted RBP10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 RBMS2Q15434 407 aaKnown RBP10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 SLC24A4Q8NFF2 622 aa10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 RNF2Q99496 336 aa10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 PUS1Q9Y606 427 aaKnown RBP eCLIP10.44□□□□□ -0.74
HLA-DMA-203ENST00000395305 OR4C46A6NHA9 309 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 PITX3O75364 302 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 SFT2D2O95562 160 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 VAMP1P23763 118 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 BMI1P35226 326 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 CMC4P56277 68 aaPredicted RBP10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 UBE2MP61081 183 aaKnown RBP10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 TRIQKQ629K1 86 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 FAM90A2PQ658T7 463 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 ETFRF1Q6IPR1 90 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 CENPSQ8N2Z9 138 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 OR1S1Q8NH92 325 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 TMEM170AQ8WVE7 144 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 SDHCQ99643 169 aaPredicted RBP10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 FAM110AQ9BQ89 295 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 RBKSQ9H477 322 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 ZFAND3Q9H8U3 227 aa10.43□□□□□ -0.74
HLA-DMA-203ENST00000395305 IGHV3-49A0A0A0MS15 119 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 CENPXA8MT69 81 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 NDUFB6O95139 128 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 NXPH3O95157 252 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 IFNA10P01566 189 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 IGKV1-17P01599 117 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 NPPCP23582 126 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 NPY1RP25929 384 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 PPP1R1AQ13522 171 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 PRSS54Q6PEW0 395 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 MUC7Q8TAX7 377 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 DTD1Q8TEA8 209 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 VSIRQ9H7M9 311 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 TMED3Q9Y3Q3 217 aa10.42□□□□□ -0.74
HLA-DMA-203ENST00000395305 LOC102724200A0A096LPH7 203 aaPredicted RBP10.41□□□□□ -0.74
HLA-DMA-203ENST00000395305 APOHP02749 345 aaPredicted RBP10.41□□□□□ -0.74
HLA-DMA-203ENST00000395305 YPEL3P61236 119 aaPredicted RBP10.41□□□□□ -0.74
HLA-DMA-203ENST00000395305 PAFAH1B2P68402 229 aa10.41□□□□□ -0.74
HLA-DMA-203ENST00000395305 OR1S2Q8NGQ3 325 aa10.41□□□□□ -0.74
HLA-DMA-203ENST00000395305 C7orf50Q9BRJ6 194 aaKnown RBP10.41□□□□□ -0.74
HLA-DMA-203ENST00000395305 GGTLC1Q9BX51 225 aa10.41□□□□□ -0.74
HLA-DMA-203ENST00000395305 EDA2RQ9HAV5 297 aa10.41□□□□□ -0.74
HLA-DMA-203ENST00000395305 IGHV3OR16-13A0A075B7E8 117 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms