RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 RPS4Y1P22090 263 aaKnown RBP3.35□□□□□ -1.87
HERC4-204ENST00000395198 CRYBB3P26998 211 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 DRD3P35462 400 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 H2BFSP57053 126 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 HERV-K104P61576 105 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 Q6ZS52 159 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 C1orf229Q6ZS94 237 aaPredicted RBP3.35□□□□□ -1.87
HERC4-204ENST00000395198 SHISA6Q6ZSJ9 500 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 TRAPPC6BQ86SZ2 158 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 ANKRD29Q8N6D5 301 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 OR5D16Q8NGK9 328 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 OR4K13Q8NH42 304 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 C20orf78Q9BR46 151 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 AICDAQ9GZX7 198 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 RPS10P5Q9NQ39 176 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 PXMP4Q9Y6I8 212 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 V9GYH0 126 aa3.35□□□□□ -1.87
HERC4-204ENST00000395198 DOCK4Q8N1I0 1966 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 DDX60LQ5H9U9 1706 aaKnown RBP3.34□□□□□ -1.87
HERC4-204ENST00000395198 MYLKQ15746 1914 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 TRIP12Q14669 1992 aaPredicted RBP3.34□□□□□ -1.87
HERC4-204ENST00000395198 A0A087WZ39 114 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 WI2-2373I1.2A0A1W2PRP0 233 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 PMS2P2O95744 297 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 EIF4EP06730 217 aaKnown RBP3.34□□□□□ -1.87
HERC4-204ENST00000395198 LINC00869P0C866 280 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 CR2P20023 1033 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 FOXC1Q12948 553 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 ZNF79Q15937 498 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 SPRNQ5BIV9 151 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 LCN8Q6JVE9 175 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 TWIST2Q8WVJ9 160 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 LSM10Q969L4 123 aaKnown RBP3.34□□□□□ -1.87
HERC4-204ENST00000395198 RNF166Q96A37 237 aaPredicted RBP3.34□□□□□ -1.87
HERC4-204ENST00000395198 RNF185Q96GF1 192 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 ANAPC10Q9UM13 185 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 KLF13Q9Y2Y9 288 aaPredicted RBP3.34□□□□□ -1.87
HERC4-204ENST00000395198 UNC13CQ8NB66 2214 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 TEX50A0A1B0GTY4 177 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 LOC107986453A0A1B0GWG9 222 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 C7orf66A4D0T2 115 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 ARRDC5A6NEK1 342 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 CDX4O14627 284 aaPredicted RBP3.34□□□□□ -1.87
HERC4-204ENST00000395198 PPIBP23284 216 aaKnown RBP3.34□□□□□ -1.87
HERC4-204ENST00000395198 FOXI1Q12951 378 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 KCTD18Q6PI47 426 aaPredicted RBP3.34□□□□□ -1.87
HERC4-204ENST00000395198 Q6ZN92 141 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 OR1J4Q8NGS1 313 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 Q9HAA7 133 aa3.34□□□□□ -1.87
HERC4-204ENST00000395198 TRGC2P03986 189 aa3.34□□□□□ -1.88
HERC4-204ENST00000395198 CECR9P0C854 216 aa3.34□□□□□ -1.88
HERC4-204ENST00000395198 LMO1P25800 156 aa3.34□□□□□ -1.88
HERC4-204ENST00000395198 TMEM75Q8N9X5 138 aa3.34□□□□□ -1.88
HERC4-204ENST00000395198 OR52N5Q8NH56 324 aa3.34□□□□□ -1.88
HERC4-204ENST00000395198 ZNF471Q9BX82 626 aaPredicted RBP3.34□□□□□ -1.88
HERC4-204ENST00000395198 C6orf106Q9H6K1 298 aaPredicted RBP3.34□□□□□ -1.88
HERC4-204ENST00000395198 SCN4AP35499 1836 aa3.34□□□□□ -1.88
HERC4-204ENST00000395198 SCN1AP35498 2009 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 TRAV8-4A0A0B4J246 113 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 MED19A0JLT2 244 aaPredicted RBP3.33□□□□□ -1.88
HERC4-204ENST00000395198 GRIFINA4D1Z8 144 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 MCRIP1C9JLW8 97 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 CD5LO43866 347 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 TYROBPO43914 113 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 ZNF883P0CG24 379 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 ZNF93P35789 620 aaPredicted RBP3.33□□□□□ -1.88
HERC4-204ENST00000395198 NCBP2P52298 156 aaKnown RBP eCLIP3.33□□□□□ -1.887e-8■■■■■ 31.4
HERC4-204ENST00000395198 RPS11P62280 158 aaKnown RBP eCLIP3.33□□□□□ -1.88
HERC4-204ENST00000395198 MSMO1Q15800 293 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 VMA21Q3ZAQ7 101 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 C11orf72Q8NBR9 251 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 NUP35Q8NFH5 326 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 OR8S1Q8NH09 359 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 FAM218AQ96MZ4 157 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 AP1S3Q96PC3 154 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 SSBP3Q9BWW4 388 aaPredicted RBP3.33□□□□□ -1.88
HERC4-204ENST00000395198 BCL2L10Q9HD36 194 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 NOTCH2Q04721 2471 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 SCN8AQ9UQD0 1980 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 PRR32B1ATL7 298 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 LOC730098B7Z3J9 87 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 ISLRO14498 428 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 GEMIN2O14893 280 aaKnown RBP3.33□□□□□ -1.88
HERC4-204ENST00000395198 CA2P00918 260 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 PSMB8P28062 276 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 SSX8Q7RTT4 187 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 ATP5L2Q7Z4Y8 100 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 WDR86Q86TI4 376 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 GVQW1Q8N7I0 195 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 MAP6D1Q9H9H5 199 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 TP73-AS1Q9UF72 201 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 PIEZO1Q92508 2521 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 COL11A2P13942 1736 aaPredicted RBP3.33□□□□□ -1.88
HERC4-204ENST00000395198 LOC100131303A0A0U1RQF7 123 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 IZUMO1RA6ND01 250 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 C4orf51C9J302 202 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 CXCL1P09341 107 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 NNATQ16517 81 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 Q6ZVQ6 151 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms