RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TMEM61Q8N0U2 210 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 OR52E5Q8NH55 327 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 SLC25A21Q9BQT8 299 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 RBKSQ9H477 322 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 SIGLEC8Q9NYZ4 499 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 C9orf170A2RU37 121 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 NAP1L6A6NFF2 107 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 MPTX1A8MV57 137 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 NDUFA4O00483 81 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 NUPL2O15504 423 aaKnown RBP5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 GNG7O60262 68 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 ADAP1O75689 374 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 IAPPP10997 89 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 SUB1P53999 127 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 CD81P60033 236 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 UBE2MP61081 183 aaKnown RBP5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 SRPXP78539 464 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 PVRIGQ6DKI7 326 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 SPSB3Q6PJ21 355 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 SBSPONQ8IVN8 264 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 SLC24A4Q8NFF2 622 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 OR52B4Q8NGK2 314 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 OR1S1Q8NH92 325 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 DTD1Q8TEA8 209 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 DEDD2Q8WXF8 326 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 MAGT1Q9H0U3 335 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 PALMDQ9NP74 551 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 HSPB7Q9UBY9 170 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 UFC1Q9Y3C8 167 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 DNAH7Q8WXX0 4024 aa5.77□□□□□ -1.49
HMGB3P1-201ENST00000393368 TRAV6A0A075B6T7 132 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 IGHV3-66A0A0C4DH42 116 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 A0A1B0GU03 582 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 CENPXA8MT69 81 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 LYRM1O43325 122 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 APOHP02749 345 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 OR4E1P0C645 316 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 C8orf88P0DMB2 117 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 NPY1RP25929 384 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 HTR2BP41595 481 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 RELQ04864 619 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 DHRS2Q13268 280 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 DCTN2Q13561 401 aaKnown RBP5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 TIGITQ495A1 244 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 C4orf46Q504U0 113 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 GGNBP1Q5YKI7 109 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 TOMM20LQ6UXN7 152 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 GTSCR1Q86UQ5 136 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 DEFB125Q8N687 156 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 LRTM2Q8N967 370 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 DUSP18Q8NEJ0 188 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 OR2K2Q8NGT1 345 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 NEURL2Q9BR09 285 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 C20orf85Q9H1P6 137 aa5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 DAZ1Q9NQZ3 744 aaKnown RBP5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 TECRQ9NZ01 308 aaKnown RBP5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 MRPL27Q9P0M9 148 aaKnown RBP5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 PUS1Q9Y606 427 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB3P1-201ENST00000393368 IGKV3-7A0A075B6H7 116 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 IGHV7-4-1A0A0J9YVY3 117 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 DUXBA0A1W2PPF3 345 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 CORTO00230 105 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 PITX3O75364 302 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 TMEM50AO95807 157 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 IFNA10P01566 189 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 FCGR2BP31994 310 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 NPBWR1P48145 328 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 RND2P52198 227 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 ELLP55199 621 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 C2orf83Q53S99 150 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 PRSS54Q6PEW0 395 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 RBPMS2Q6ZRY4 209 aaKnown RBP5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 LYG2Q86SG7 212 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 ACY3Q96HD9 319 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 ATP6V0BQ99437 205 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 RNF2Q99496 336 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 TXN2Q99757 166 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 C7orf50Q9BRJ6 194 aaKnown RBP5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 HIPK2Q9H2X6 1198 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 C19orf73Q9NVV2 129 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 UBQLN2Q9UHD9 624 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 TBC1D24Q9ULP9 559 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 PAIP2BQ9ULR5 123 aaKnown RBP5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 TMED3Q9Y3Q3 217 aa5.75□□□□□ -1.49
HMGB3P1-201ENST00000393368 C15orf62A8K5M9 175 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 OR11H12B2RN74 326 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 H3BP45 60 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 WRBO00258 174 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 CCSO14618 274 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 CHEK1O14757 476 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 CLN5O75503 358 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 IGKV1-17P01599 117 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 TFPI2P48307 235 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 ZNF600Q6ZNG1 722 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 SLC16A13Q7RTY0 426 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 LILRB2Q8N423 598 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 TMEM116Q8NCL8 245 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 OR4X1Q8NH49 305 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 COQ8AQ8NI60 647 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 ST8SIA2Q92186 375 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms