RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 EFNB3Q15768 340 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 GCSAMLQ5JQS6 135 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 MESP1Q9BRJ9 268 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 IGHV3OR16-10A0A075B7F0 116 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 SUMO2P61956 95 aaKnown RBP10.95□□□□□ -0.66
LCA5-202ENST00000392959 GNG5P63218 68 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 BSPH1Q075Z2 132 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 MTURNQ8N3F0 131 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 FAM166AQ6J272 317 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 EPDR1Q9UM22 224 aa10.95□□□□□ -0.66
LCA5-202ENST00000392959 CXCL1P09341 107 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 HIST3H2BBQ8N257 126 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 ZIC4Q8N9L1 334 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 FGFBP3Q8TAT2 258 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 ARPC1AQ92747 370 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 REG4Q9BYZ8 158 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 LCTP09848 1927 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 TRAV9-2A0A087WT02 112 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 H7C1H1 209 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 PYYP10082 97 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 PDLIM4P50479 330 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 RTN4RL2Q86UN3 420 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 PRDM6Q9NQX0 595 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 DUX5Q96PT3 197 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 DNAL4O96015 105 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 PPP1R27Q86WC6 154 aa10.94□□□□□ -0.66
LCA5-202ENST00000392959 PDCD11Q14690 1871 aaKnown RBP10.94□□□□□ -0.66
LCA5-202ENST00000392959 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.93□□□□□ -0.66
LCA5-202ENST00000392959 OR9G9P0C7N8 305 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 C1QL4Q86Z23 238 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 MRAP2Q96G30 205 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 PI4KAP42356 2102 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 MYO7BQ6PIF6 2116 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 PSMB11A5LHX3 300 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 FABP5P3A8MUU1 101 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 PRCDQ00LT1 54 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 GNB1LQ9BYB4 327 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 NYNRINQ9P2P1 1898 aaKnown RBP10.93□□□□□ -0.66
LCA5-202ENST00000392959 IGKV3OR2-268A0A0C4DH90 116 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 TCRBV4S1A1TA0A5B7 111 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 GFI1BQ5VTD9 330 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 APOMO95445 188 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 TFF1P04155 84 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 ZNF418Q8TF45 676 aaPredicted RBP10.93□□□□□ -0.66
LCA5-202ENST00000392959 C5orf30Q96GV9 206 aa10.93□□□□□ -0.66
LCA5-202ENST00000392959 RALGAPA2Q2PPJ7 1873 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 AMBPP02760 352 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 RNASE1P07998 156 aaKnown RBP10.92□□□□□ -0.66
LCA5-202ENST00000392959 LINC00614P0C842 121 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 COX6B1P14854 86 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 ALKBH7Q9BT30 221 aaPredicted RBP10.92□□□□□ -0.66
LCA5-202ENST00000392959 MRPS16Q9Y3D3 137 aaKnown RBP10.92□□□□□ -0.66
LCA5-202ENST00000392959 LRRK1Q38SD2 2015 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 H3BUT2 72 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 SRSF7Q16629 238 aaKnown RBP eCLIP10.92□□□□□ -0.66
LCA5-202ENST00000392959 CENPVQ7Z7K6 275 aaPredicted RBP10.92□□□□□ -0.66
LCA5-202ENST00000392959 SEMA5BQ9P283 1151 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 TNFRSF18Q9Y5U5 241 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 A0A0G2JLM5 398 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 FAM181BA6NEQ2 426 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 FAM90A9PA6NNJ1 464 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 STAG3L3P0CL85 134 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 TREML4Q6UXN2 200 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 RPP25LQ8N5L8 163 aaKnown RBP10.92□□□□□ -0.66
LCA5-202ENST00000392959 FAM57AQ8TBR7 257 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 NABP1Q96AH0 204 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 FER1L5A0AVI2 2057 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 TEX29Q8N6K0 151 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 RNF125Q96EQ8 232 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 NUDT11Q96G61 164 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 CLDN16Q9Y5I7 305 aa10.92□□□□□ -0.66
LCA5-202ENST00000392959 SHANK1Q9Y566 2161 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 A0A1B0GV72 72 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 A0A1B0GW64 132 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 NPFFO15130 113 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 TIMP3P35625 211 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 CFHR1Q03591 330 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 PVRIGQ6DKI7 326 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 NEU4Q8WWR8 484 aaPredicted RBP10.91□□□□□ -0.66
LCA5-202ENST00000392959 DMRTA2Q96SC8 542 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 JKAMPQ9P055 326 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 NBR2O15453 112 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 CEACAM1P13688 526 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 NMSQ5H8A3 153 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 CLEC19AQ6UXS0 136 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 ASCL2Q99929 193 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 GGTLC1Q9BX51 225 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 IGKV1-27A0A075B6S5 117 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 FOXG1P55316 489 aaPredicted RBP10.91□□□□□ -0.66
LCA5-202ENST00000392959 OR10J3Q5JRS4 329 aa10.91□□□□□ -0.66
LCA5-202ENST00000392959 TMEM50AO95807 157 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 HBDP02042 147 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 TYMSP04818 313 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 FOXF2Q12947 444 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 KLHDC3Q9BQ90 382 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 TMEM133Q9H2Q1 129 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 PSG8Q9UQ74 426 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 PSME4Q14997 1843 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms