RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 APOEP02649 317 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 UGT2B7P16662 529 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 MYL12AP19105 171 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 LCN1P31025 176 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 Q3ZCU0 254 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 CST9Q5W186 159 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 LPCAT3Q6P1A2 487 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 Q6ZS49 121 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 COPS6Q7L5N1 327 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 TEN1Q86WV5 123 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 CD302Q8IX05 232 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 HIST3H2BBQ8N257 126 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 SIGLECL1Q8N7X8 197 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 OR13C4Q8NGS5 318 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 GPR146Q96CH1 333 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 WDR61Q9GZS3 305 aaKnown RBP-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 C15orf41Q9Y2V0 281 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 MCM3APO60318 1980 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 TOPBP1Q92547 1522 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 IGF2RP11717 2491 aa-0.2□□□□□ -2.44
SNORD28B-201ENST00000390993 DCCP43146 1447 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 DOCK3Q8IZD9 2030 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 TRBV30A0A0K0K1B3 111 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 TINCRA0A1B0GVN0 87 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 NUPR2A6NF83 97 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 AHSA1O95433 338 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 S100A4P26447 101 aaKnown RBP-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 ANP32AP39687 249 aaKnown RBP-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 MARCKSL1P49006 195 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 MAP3K7CLP57077 242 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 HBA1P69905 142 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 PPP1R1AQ13522 171 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 RSU1Q15404 277 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 KISS1Q15726 138 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 C10orf99Q6UWK7 81 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 COMMD7Q86VX2 200 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 LRRC25Q8N386 305 aaPredicted RBP-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 RIBC1Q8N443 379 aaPredicted RBP-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 MRPL30Q8TCC3 161 aaKnown RBP-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 SMIM19Q96E16 107 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 IMP4Q96G21 291 aaKnown RBP-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 KCTD7Q96MP8 289 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 TP53RKQ96S44 253 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 GPER1Q99527 375 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 TMEM138Q9NPI0 162 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 OSTCQ9NRP0 149 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 ERGIC3Q9Y282 383 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 TNS3Q68CZ2 1445 aa-0.21□□□□□ -2.44
SNORD28B-201ENST00000390993 RALGAPA2Q2PPJ7 1873 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 CCDC88AQ3V6T2 1871 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 ABCA4P78363 2273 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 TRAV9-1A0A075B6T8 112 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 TCRBV4S1A1TA0A5B7 111 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 ZNF879B4DU55 563 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 MKRN2OSH3BPM6 223 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 GPR31O00270 319 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 PFDN6O15212 129 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 DHFRP00374 187 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 TPM1P09493 284 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 OCMP0CE72 109 aaPredicted RBP-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 RD3LP0DJH9 198 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 CCL1P22362 96 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 MAP2K4P45985 399 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 CLDN12P56749 244 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 YPEL3P61236 119 aaPredicted RBP-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 GUK1Q16774 197 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 ESRGQ1W209 222 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 DEFB113Q30KQ7 82 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 SPATA45Q537H7 98 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 Q5BKY6 102 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 PLEKHG7Q6ZR37 379 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 GDPD1Q8N9F7 314 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 TMEM161BQ8NDZ6 487 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 OR13D1Q8NGV5 346 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 CANT1Q8WVQ1 401 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 OR51V1Q9H2C8 321 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 CHMP4BQ9H444 224 aaKnown RBP-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 PSTPIP2Q9H939 334 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 TAS2R7Q9NYW3 318 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 EPDR1Q9UM22 224 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 V9GYY5 206 aaPredicted RBP-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 CITO14578 2027 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 TET1Q8NFU7 2136 aa-0.22□□□□□ -2.44
SNORD28B-201ENST00000390993 ANK2Q01484 3957 aa-0.22□□□□□ -2.45
SNORD28B-201ENST00000390993 KIAA1549Q9HCM3 1950 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 CASP8AP2Q9UKL3 1982 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 TRAV3A0A0B4J244 114 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 F8W1H4 67 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 BIRC5O15392 142 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 HLA-DRAP01903 254 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 CCL4P13236 92 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 BRMS1LQ5PSV4 323 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 BOD1L2Q8IYS8 172 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 DEFB125Q8N687 156 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 OR2T35Q8NGX2 323 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 OR2T10Q8NGZ9 312 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 TERB2Q8NHR7 220 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 TOMM6Q96B49 74 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 LINC00052Q96N35 136 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 OR52A5Q9H2C5 316 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms