RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ANAPC13Q9BS18 74 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 THTPAQ9BU02 230 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 TMEM243Q9BU79 118 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 RTL8AQ9BWD3 113 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF471Q9BX82 626 aaPredicted RBP1.2□□□□□ -2.22
TRAV40-201ENST00000390467 AICDAQ9GZX7 198 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 OTORQ9NRC9 128 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 FBXL12Q9NXK8 326 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 TAAR3PQ9P1P4 343 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 TRMT112Q9UI30 125 aaKnown RBP1.2□□□□□ -2.22
TRAV40-201ENST00000390467 POMPQ9Y244 141 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 FIS1Q9Y3D6 152 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 ENPP4Q9Y6X5 453 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 V9GYS6 101 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 ADAMTSL1Q8N6G6 1762 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 OVOS2A0A0G2JMS6 1433 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 DISP2A7MBM2 1401 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 TECPR2O15040 1411 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 ARHGAP31Q2M1Z3 1444 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 ADAMTS13Q76LX8 1427 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 PRG4Q92954 1404 aaPredicted RBP1.2□□□□□ -2.22
TRAV40-201ENST00000390467 PHLPP1O60346 1717 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 ARHGEF11O15085 1522 aa1.2□□□□□ -2.22
TRAV40-201ENST00000390467 DNMT1P26358 1616 aaKnown RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 DICER1Q9UPY3 1922 aaKnown RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 IGHV1-69-2A0A0G2JMI3 117 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 A0A1W2PNN7 141 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 GGT3PA6NGU5 568 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 CD300LBA8K4G0 201 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 A8MUN3 132 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 GGTLC3B5MD39 225 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 M0R381 172 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 LST1O00453 97 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 CDC42EP2O14613 210 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 NPFFO15130 113 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 GSTZ1O43708 216 aaPredicted RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 DEDDO75618 318 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 MAS1P04201 325 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 PSMB8P28062 276 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 CASP1P29466 404 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 OPRM1P35372 400 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 INPP1P49441 399 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 RAB5CP51148 216 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 LINC00313P59037 77 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 UBE2NP61088 152 aaKnown RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 FKBP1AP62942 108 aaKnown RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 ADIGQ0VDE8 80 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 EIF3IQ13347 325 aaKnown RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 RTL8BQ17RB0 113 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 PYY3Q5JQD4 70 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 LYRM7Q5U5X0 104 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 NXNL2Q5VZ03 156 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 DNAJC24Q6P3W2 148 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 RPL22L1Q6P5R6 122 aaKnown RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF773Q6PK81 442 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 SPATA31E1Q6ZUB1 1445 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 SLC35E3Q7Z769 313 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 MARCH3Q86UD3 253 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 GKN2Q86XP6 184 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 SLC22A24Q8N4F4 322 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 MMGT1Q8N4V1 131 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 C3orf22Q8N5N4 141 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 DRAM1Q8N682 238 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 FER1L6-AS1Q8NA97 138 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 PLPP5Q8NEB5 264 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 OR2M3Q8NG83 312 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 SGMS2Q8NHU3 365 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 LINC01560Q8TB33 94 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 CIRBP-AS1Q8TBR5 109 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 NUP210Q8TEM1 1887 aaPredicted RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 C15orf40Q8WUR7 153 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 TWIST2Q8WVJ9 160 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 TVP23CQ96ET8 276 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 ZC2HC1AQ96GY0 325 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 C2orf50Q96LR7 162 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 SDF2Q99470 211 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 SLC25A21Q9BQT8 299 aaPredicted RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 NAA38Q9BRA0 125 aaKnown RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 C1QTNF6Q9BXI9 259 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 MRPL20Q9BYC9 149 aaKnown RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF436Q9C0F3 470 aaPredicted RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 IMUPQ9GZP8 106 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 COMMD5Q9GZQ3 224 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 PLEKHF2Q9H8W4 249 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 CXorf21Q9HAI6 301 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 TVP23BQ9NYZ1 205 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 PCTPQ9UKL6 214 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 KIAA1107Q9UPP5 1409 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 MYH9P35579 1960 aaKnown RBP1.19□□□□□ -2.22
TRAV40-201ENST00000390467 SVILO95425 2214 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 DSCAML1Q8TD84 2053 aa1.19□□□□□ -2.22
TRAV40-201ENST00000390467 CCDC18Q5T9S5 1454 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 MBD5Q9P267 1494 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 CHD3Q12873 2000 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 NUP205Q92621 2012 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 SBF1O95248 1867 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 DNMBPQ6XZF7 1577 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 EML6Q6ZMW3 1958 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 PHIPQ8WWQ0 1821 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 TRBV20OR9-2A0A075B6H5 130 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms