RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 PRTN3P24158 256 aa8.46□□□□□ -1.05
PKP4-201ENST00000389757 GTSCR1Q86UQ5 136 aa8.46□□□□□ -1.05
PKP4-201ENST00000389757 NEU1Q99519 415 aa8.46□□□□□ -1.05
PKP4-201ENST00000389757 ANAPC1Q9H1A4 1944 aa8.46□□□□□ -1.05
PKP4-201ENST00000389757 MDKP21741 143 aaPredicted RBP8.46□□□□□ -1.06
PKP4-201ENST00000389757 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.06
PKP4-201ENST00000389757 OR1P1Q8NH06 330 aa8.46□□□□□ -1.06
PKP4-201ENST00000389757 KIR2DL4Q99706 377 aa8.46□□□□□ -1.06
PKP4-201ENST00000389757 Q9H3A6 140 aa8.46□□□□□ -1.06
PKP4-201ENST00000389757 PAX1P15863 534 aa8.46□□□□□ -1.06
PKP4-201ENST00000389757 COQ2Q96H96 371 aa8.46□□□□□ -1.06
PKP4-201ENST00000389757 PKDREJQ9NTG1 2253 aa8.46□□□□□ -1.06
PKP4-201ENST00000389757 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.06
PKP4-201ENST00000389757 LDLRAD4O15165 306 aa8.46□□□□□ -1.06
PKP4-201ENST00000389757 GGCTO75223 188 aaKnown RBP8.46□□□□□ -1.06
PKP4-201ENST00000389757 C5orf64Q2M2E5 130 aa8.46□□□□□ -1.06
PKP4-201ENST00000389757 C10orf55Q5SWW7 151 aa8.46□□□□□ -1.06
PKP4-201ENST00000389757 TRBV6-6A0A0A6YYG2 114 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 M0R381 172 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 ZNF324O75467 553 aaPredicted RBP8.45□□□□□ -1.06
PKP4-201ENST00000389757 WT1P19544 449 aaPredicted RBP8.45□□□□□ -1.06
PKP4-201ENST00000389757 EMP1P54849 157 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 C15orf32Q32M92 178 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 ZNF506Q5JVG8 444 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 OR1N2Q8NGR9 330 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 ZNF502Q8TBZ5 544 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 Q96MF0 132 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 M0R3E3 92 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 ID3Q02535 119 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 ZNF585BQ52M93 769 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 OR10W1Q8NGF6 305 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 FMC1Q96HJ9 113 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 BDP1A6H8Y1 2624 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 FOSL1P15407 271 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 RNASE4P34096 147 aaKnown RBP8.45□□□□□ -1.06
PKP4-201ENST00000389757 LYRM7Q5U5X0 104 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 SFRP2Q96HF1 295 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 TBX15Q96SF7 602 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 HTN3P15516 51 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 SAA4P35542 130 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 FHL1Q13642 323 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 OTORQ9NRC9 128 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 MBNL3Q9NUK0 354 aaKnown RBP8.45□□□□□ -1.06
PKP4-201ENST00000389757 ZMAT5Q9UDW3 170 aaKnown RBP8.45□□□□□ -1.06
PKP4-201ENST00000389757 ZFP30Q9Y2G7 519 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 USF3Q68DE3 2245 aa8.45□□□□□ -1.06
PKP4-201ENST00000389757 TRGV2A0A075B6R0 118 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 TMEM262E9PQX1 116 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 J3QR89 54 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 SAP30O75446 220 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 NUP210Q8TEM1 1887 aaPredicted RBP8.44□□□□□ -1.06
PKP4-201ENST00000389757 SDF2L1Q9HCN8 221 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 H0YJW9 148 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 HEATR1Q9H583 2144 aaKnown RBP8.44□□□□□ -1.06
PKP4-201ENST00000389757 TRBV20OR9-2A0A075B6H5 130 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 CIARTQ8N365 385 aaPredicted RBP8.44□□□□□ -1.06
PKP4-201ENST00000389757 MRPL18Q9H0U6 180 aaKnown RBP8.44□□□□□ -1.06
PKP4-201ENST00000389757 TNFRSF18Q9Y5U5 241 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 VENTXO95231 258 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 GCSHP23434 173 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 LEPP41159 167 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 TEX38Q6PEX7 206 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 SLX1AQ9BQ83 275 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 PSMB2P49721 201 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 CMC4P56277 68 aaPredicted RBP8.44□□□□□ -1.06
PKP4-201ENST00000389757 LRTM2Q8N967 370 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 VOPP1Q96AW1 172 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 ZNF407Q9C0G0 2248 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 FANCMQ8IYD8 2048 aa8.44□□□□□ -1.06
PKP4-201ENST00000389757 PCNX2A6NKB5 2137 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 BTCP35070 178 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 LEMD1Q68G75 181 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 PUSL1Q8N0Z8 303 aaKnown RBP8.43□□□□□ -1.06
PKP4-201ENST00000389757 M0R143 59 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 CD55P08174 381 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 GATA4P43694 442 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 EFNB3Q15768 340 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 PAPPA-AS1Q5QFB9 102 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 LHFPL1Q86WI0 220 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 MAPK1IP1LQ8NDC0 245 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 Q8TCH9 128 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 IGKV3OR2-268A0A0C4DH90 116 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 UQCRFS1P47985 274 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 HBBP68871 147 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 FAM71F2Q6NXP2 309 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 SPSB3Q6PJ21 355 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 C3orf56Q8N813 242 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 GLMPQ8WWB7 406 aa8.43□□□□□ -1.06
PKP4-201ENST00000389757 RNF144BQ7Z419 303 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 KCNS1Q96KK3 526 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 RNF222A6NCQ9 220 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 CXorf65A6NEN9 183 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 DCAF16Q9NXF7 216 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 RNF114Q9Y508 228 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 PPP1R17O96001 155 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 UBE2E1P51965 193 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 OR4D5Q8NGN0 318 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 PRO3102Q9H379 93 aa8.42□□□□□ -1.06
PKP4-201ENST00000389757 GBF1Q92538 1859 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms