RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CDC42P60953 191 aa1.99□□□□□ -2.09
RNU6-40P-201ENST00000384254 ERVS71-1P61550 626 aa1.99□□□□□ -2.09
RNU6-40P-201ENST00000384254 OSTCQ9NRP0 149 aa1.99□□□□□ -2.09
RNU6-40P-201ENST00000384254 TVP23BQ9NYZ1 205 aa1.99□□□□□ -2.09
RNU6-40P-201ENST00000384254 CYSLTR1Q9Y271 337 aa1.99□□□□□ -2.09
RNU6-40P-201ENST00000384254 FAM32AQ9Y421 112 aaKnown RBP1.99□□□□□ -2.09
RNU6-40P-201ENST00000384254 ROBO3Q96MS0 1386 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 CCDC88CQ9P219 2028 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 BUB1B-PAK6H3BSN5 160 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 ZNF682O95780 498 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 COX6A1P12074 109 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 HSD11B1P28845 292 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 G6PCP35575 357 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 SPANXN5Q5MJ07 72 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 SIGLECL1Q8N7X8 197 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 GNPDA2Q8TDQ7 276 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 DGCR14Q96DF8 476 aaKnown RBP1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 PHB2Q99623 299 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 MIXL1Q9H2W2 232 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 OR5AC2Q9NZP5 309 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 COL4A1P02462 1669 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 CCDC144AA2RUR9 1427 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 RIC1Q4ADV7 1423 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 HECW2Q9P2P5 1572 aa1.98□□□□□ -2.09
RNU6-40P-201ENST00000384254 TRAV14DV4A0A0A6YYC5 116 aa1.97□□□□□ -2.09
RNU6-40P-201ENST00000384254 TMEM212A6NML5 194 aa1.97□□□□□ -2.09
RNU6-40P-201ENST00000384254 SERPINA1P01009 418 aa1.97□□□□□ -2.09
RNU6-40P-201ENST00000384254 CLPSP04118 112 aa1.97□□□□□ -2.09
RNU6-40P-201ENST00000384254 SHBGP04278 402 aa1.97□□□□□ -2.09
RNU6-40P-201ENST00000384254 RHEBQ15382 184 aa1.97□□□□□ -2.09
RNU6-40P-201ENST00000384254 OR52L1Q8NGH7 329 aa1.97□□□□□ -2.09
RNU6-40P-201ENST00000384254 SLC25A40Q8TBP6 338 aa1.97□□□□□ -2.09
RNU6-40P-201ENST00000384254 CYSTM1Q9H1C7 97 aa1.97□□□□□ -2.09
RNU6-40P-201ENST00000384254 MED9Q9NWA0 146 aa1.97□□□□□ -2.09
RNU6-40P-201ENST00000384254 OR2B3O76000 313 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 OR2J2O76002 312 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 PRB1P04280 392 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 CRYGAP11844 174 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 ERP29P30040 261 aaKnown RBP1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 BASP1P80723 227 aaKnown RBP1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 LYRM7Q5U5X0 104 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 TEX36Q5VZQ5 186 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 Q6Q795 121 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 Q6ZQT0 140 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 ZNF826PQ6ZT77 177 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 ADAT1Q9BUB4 502 aaKnown RBP1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 ENY2Q9NPA8 101 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 NHP2Q9NX24 153 aaKnown RBP1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 SOX21Q9Y651 276 aaPredicted RBP1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 SETD5Q9C0A6 1442 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 FREM1Q5H8C1 2179 aa1.96□□□□□ -2.1
RNU6-40P-201ENST00000384254 IGKV3D-7A0A0C4DH55 119 aa1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 IGKV3OR2-268A0A0C4DH90 116 aa1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 C19orf84I3L1E1 186 aa1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 MRPS14O60783 128 aaKnown RBP1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 IL9P15248 144 aa1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 SPI1P17947 270 aa1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 RHOBP62745 196 aa1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 ZNF846Q147U1 533 aa1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 CDK5R1Q15078 307 aa1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 PHF13Q86YI8 300 aaPredicted RBP1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 C12orf45Q8N5I9 185 aaPredicted RBP1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 CEP19Q96LK0 163 aa1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 SLC50A1Q9BRV3 221 aa1.95□□□□□ -2.1
RNU6-40P-201ENST00000384254 NEO1Q92859 1461 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 GLI3P10071 1580 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 ECM29Q5VYK3 1845 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 IGKV2-40A0A087WW87 121 aaPredicted RBP1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 A0A087X0T9 212 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 C1orf196B1AJZ1 125 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 IGKV2D-40P01614 121 aaPredicted RBP1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 FKBP2P26885 142 aaKnown RBP1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 LINC01554Q52M75 96 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 Q6ZSA8 131 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 C12orf29Q8N999 325 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 FAM172AQ8WUF8 416 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 PSTPIP2Q9H939 334 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 TAS2R4Q9NYW5 299 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 OPTCQ9UBM4 332 aa1.94□□□□□ -2.1
RNU6-40P-201ENST00000384254 HECW1Q76N89 1606 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 IGKV1D-42A0A075B6H8 117 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 CYB5BO43169 146 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 CTSDP07339 412 aaPredicted RBP1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 CST2P09228 141 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 OR4E1P0C645 316 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 OR11H6Q8NGC7 330 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 OR8D4Q8NGM9 314 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 GPR146Q96CH1 333 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 C9orf16Q9BUW7 83 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 PARVBQ9HBI1 364 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 EPDR1Q9UM22 224 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 ARL5AQ9Y689 179 aa1.93□□□□□ -2.1
RNU6-40P-201ENST00000384254 SCN10AQ9Y5Y9 1956 aa1.92□□□□□ -2.1
RNU6-40P-201ENST00000384254 DEFA3P59666 94 aa1.92□□□□□ -2.1
RNU6-40P-201ENST00000384254 UNQ6190/PRO20217Q6UXQ8 127 aa1.92□□□□□ -2.1
RNU6-40P-201ENST00000384254 LCA10Q71F78 164 aa1.92□□□□□ -2.1
RNU6-40P-201ENST00000384254 OR52R1Q8NGF1 315 aa1.92□□□□□ -2.1
RNU6-40P-201ENST00000384254 HIST1H2BLQ99880 126 aa1.92□□□□□ -2.1
RNU6-40P-201ENST00000384254 SLC35A3Q9Y2D2 325 aa1.92□□□□□ -2.1
RNU6-40P-201ENST00000384254 BAZ2BQ9UIF8 2168 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms