RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 TBX6O95947 436 aaPredicted RBP4.92□□□□□ -1.62
RFX3-204ENST00000382004 ITGBL1O95965 494 aaPredicted RBP4.92□□□□□ -1.62
RFX3-204ENST00000382004 UMODP07911 640 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 MRPL52Q86TS9 123 aaKnown RBP4.92□□□□□ -1.62
RFX3-204ENST00000382004 MPTX1A8MV57 137 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 SAP30O75446 220 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 RHOGP84095 191 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 TMEM126AQ9H061 195 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 GP6Q9HCN6 339 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 NPDC1Q9NQX5 325 aaPredicted RBP4.92□□□□□ -1.62
RFX3-204ENST00000382004 ANKRD36A6QL64 1941 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 C1QTNF9P0C862 333 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 CDKN1AP38936 164 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 RPL23P62829 140 aaKnown RBP4.92□□□□□ -1.62
RFX3-204ENST00000382004 HSD52Q0P140 79 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 NCOR1O75376 2440 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.92□□□□□ -1.62
RFX3-204ENST00000382004 C12orf77C9JDV5 145 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 CEACAM8P31997 349 aaPredicted RBP4.92□□□□□ -1.62
RFX3-204ENST00000382004 LIMS1P48059 325 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 ZNF876PQ49A33 203 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 SLC50A1Q9BRV3 221 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 PSG8Q9UQ74 426 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 TJP1Q07157 1748 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 TRGV1A0A0A0MS02 117 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 H3BMM0 161 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 PYYP10082 97 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 PRR31Q5SQ13 230 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 UBE2WQ96B02 151 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 ABHD17AQ96GS6 310 aa4.92□□□□□ -1.62
RFX3-204ENST00000382004 GTF3C1Q12789 2109 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 CACNA1IQ9P0X4 2223 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 NGFRP08138 427 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 C1QL4Q86Z23 238 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 SNHG12Q9BXW3 62 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 RICTORQ6R327 1708 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 TRAV9-1A0A075B6T8 112 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 NBR2O15453 112 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 ERCC8Q13216 396 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 FDCSPQ8NFU4 85 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 RASL10AQ92737 203 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 LINC00527Q9UJ94 153 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 C9orf153Q5TBE3 101 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 SLC22A18ASQ8N1D0 253 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 RNF125Q96EQ8 232 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 NRAPQ86VF7 1730 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 IGKV2-40A0A087WW87 121 aaPredicted RBP4.91□□□□□ -1.62
RFX3-204ENST00000382004 LINC00587B1AMM8 73 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 IGKV2D-40P01614 121 aaPredicted RBP4.91□□□□□ -1.62
RFX3-204ENST00000382004 SIGLEC15Q6ZMC9 328 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 BTAF1O14981 1849 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 CD55P08174 381 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 C8orf82Q6P1X6 216 aaPredicted RBP4.91□□□□□ -1.62
RFX3-204ENST00000382004 CACNG8Q8WXS5 425 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 SPSB2Q99619 263 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 METRNQ9UJH8 293 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 CD5LO43866 347 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 COX5BP10606 129 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 CCL3L1P16619 93 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 SEC11AP67812 179 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 TEX43Q6ZNM6 134 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.91□□□□□ -1.62
RFX3-204ENST00000382004 CECR9P0C854 216 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 COX6A1P12074 109 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 Q6ZT83 130 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 BHLHA9Q7RTU4 235 aa4.91□□□□□ -1.62
RFX3-204ENST00000382004 RSPO3Q9BXY4 272 aaPredicted RBP4.91□□□□□ -1.62
RFX3-204ENST00000382004 FAM186AA6NE01 2351 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 NDUFS5O43920 106 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 C1QL2Q7Z5L3 287 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 TMEM170AQ8WVE7 144 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 C1orf159Q96HA4 380 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 DEPPQ9NTK1 212 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 TRAV25A0A0B4J276 109 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 F2Z2F3 143 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 LCNL1Q6ZST4 164 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 BCL6BQ8N143 479 aaPredicted RBP4.9□□□□□ -1.62
RFX3-204ENST00000382004 PIN1P1O15428 100 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 PAX8Q06710 450 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 KIAA2026Q5HYC2 2103 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 RIPPLY2Q5TAB7 128 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 DLX4Q92988 240 aaPredicted RBP4.9□□□□□ -1.62
RFX3-204ENST00000382004 PLEKHB2Q96CS7 222 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 DOCK1Q14185 1865 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 NACAE9PAV3 2078 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 TRAV13-1A0A0B4J241 112 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 PPBPP02775 128 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 SPINK8P0C7L1 97 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 CCL20P78556 96 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 SMRP1Q8NCR6 262 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 CRIM1Q9NZV1 1036 aa4.9□□□□□ -1.62
RFX3-204ENST00000382004 A0A087WWC5 75 aa4.9□□□□□ -1.63
RFX3-204ENST00000382004 LHBP01229 141 aa4.9□□□□□ -1.63
RFX3-204ENST00000382004 RPL36AP83881 106 aaKnown RBP4.9□□□□□ -1.63
RFX3-204ENST00000382004 RPL36ALQ969Q0 106 aaKnown RBP4.9□□□□□ -1.63
RFX3-204ENST00000382004 CHCHD1Q96BP2 118 aaKnown RBP4.9□□□□□ -1.63
RFX3-204ENST00000382004 PLSCR4Q9NRQ2 329 aa4.9□□□□□ -1.63
RFX3-204ENST00000382004 TRBV5-3A0A0A0MS03 114 aa4.9□□□□□ -1.63
RFX3-204ENST00000382004 C5orf47Q569G3 176 aa4.9□□□□□ -1.63
RFX3-204ENST00000382004 OVOL2Q9BRP0 275 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms